Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.19■□□□□ 0.98
SPTBN4Q9H254 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTBN4Q9H254 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTBN4Q9H254 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SPTBN4Q9H254 CYP2T1P-201ENST00000432607 1285 ntBASIC21.18■□□□□ 0.98
SPTBN4Q9H254 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SPTBN4Q9H254 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.18■□□□□ 0.98
SPTBN4Q9H254 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTBN4Q9H254 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTBN4Q9H254 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPTBN4Q9H254 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPTBN4Q9H254 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPTBN4Q9H254 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPTBN4Q9H254 AC097658.1-201ENST00000475555 843 ntBASIC21.18■□□□□ 0.98
SPTBN4Q9H254 AP001160.3-201ENST00000601484 763 ntBASIC21.18■□□□□ 0.98
SPTBN4Q9H254 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.18■□□□□ 0.98
SPTBN4Q9H254 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTBN4Q9H254 AC016405.3-201ENST00000607710 860 ntBASIC21.17■□□□□ 0.98
SPTBN4Q9H254 OR10C1-204ENST00000622521 1039 ntBASIC21.17■□□□□ 0.98
SPTBN4Q9H254 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTBN4Q9H254 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.17■□□□□ 0.98
SPTBN4Q9H254 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.17■□□□□ 0.98
SPTBN4Q9H254 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.17■□□□□ 0.98
SPTBN4Q9H254 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTBN4Q9H254 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
SPTBN4Q9H254 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPTBN4Q9H254 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SPTBN4Q9H254 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPTBN4Q9H254 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.16■□□□□ 0.98
SPTBN4Q9H254 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.16■□□□□ 0.98
SPTBN4Q9H254 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPTBN4Q9H254 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SPTBN4Q9H254 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SPTBN4Q9H254 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.16■□□□□ 0.98
SPTBN4Q9H254 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SPTBN4Q9H254 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SPTBN4Q9H254 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.16■□□□□ 0.98
SPTBN4Q9H254 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.16■□□□□ 0.98
SPTBN4Q9H254 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SPTBN4Q9H254 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.15■□□□□ 0.98
SPTBN4Q9H254 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.15■□□□□ 0.98
SPTBN4Q9H254 RPPH1-201ENST00000516869 333 ntBASIC21.15■□□□□ 0.98
SPTBN4Q9H254 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.15■□□□□ 0.98
SPTBN4Q9H254 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPTBN4Q9H254 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.15■□□□□ 0.98
SPTBN4Q9H254 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPTBN4Q9H254 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPTBN4Q9H254 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.15■□□□□ 0.98
SPTBN4Q9H254 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPTBN4Q9H254 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SPTBN4Q9H254 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPTBN4Q9H254 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
SPTBN4Q9H254 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.14■□□□□ 0.98
SPTBN4Q9H254 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.14■□□□□ 0.98
SPTBN4Q9H254 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SPTBN4Q9H254 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.14■□□□□ 0.98
SPTBN4Q9H254 AC133561.5-201ENST00000635547 218 ntBASIC21.14■□□□□ 0.98
SPTBN4Q9H254 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPTBN4Q9H254 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.14■□□□□ 0.97
SPTBN4Q9H254 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPTBN4Q9H254 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPTBN4Q9H254 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.13■□□□□ 0.97
SPTBN4Q9H254 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPTBN4Q9H254 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPTBN4Q9H254 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPTBN4Q9H254 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SPTBN4Q9H254 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPTBN4Q9H254 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.13■□□□□ 0.97
SPTBN4Q9H254 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.13■□□□□ 0.97
SPTBN4Q9H254 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPTBN4Q9H254 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.12■□□□□ 0.97
SPTBN4Q9H254 AL512625.2-201ENST00000417533 625 ntBASIC21.12■□□□□ 0.97
SPTBN4Q9H254 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.12■□□□□ 0.97
SPTBN4Q9H254 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.12■□□□□ 0.97
SPTBN4Q9H254 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.12■□□□□ 0.97
SPTBN4Q9H254 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPTBN4Q9H254 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPTBN4Q9H254 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SPTBN4Q9H254 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.12■□□□□ 0.97
SPTBN4Q9H254 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.12■□□□□ 0.97
SPTBN4Q9H254 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SPTBN4Q9H254 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.11■□□□□ 0.97
SPTBN4Q9H254 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
SPTBN4Q9H254 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
SPTBN4Q9H254 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.11■□□□□ 0.97
SPTBN4Q9H254 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SPTBN4Q9H254 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPTBN4Q9H254 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPTBN4Q9H254 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
SPTBN4Q9H254 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPTBN4Q9H254 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.1■□□□□ 0.97
SPTBN4Q9H254 AC008694.1-202ENST00000636953 945 ntBASIC21.1■□□□□ 0.97
SPTBN4Q9H254 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms