Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX47Q9H0S4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
DDX47Q9H0S4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
DDX47Q9H0S4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
DDX47Q9H0S4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.64■■□□□ 1.22
DDX47Q9H0S4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
DDX47Q9H0S4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
DDX47Q9H0S4 AC012354.3-201ENST00000623734 483 ntBASIC22.64■■□□□ 1.21
DDX47Q9H0S4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX47Q9H0S4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
DDX47Q9H0S4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
DDX47Q9H0S4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX47Q9H0S4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.64■■□□□ 1.21
DDX47Q9H0S4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX47Q9H0S4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
DDX47Q9H0S4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
DDX47Q9H0S4 SLC25A24-204ENST00000569674 2357 ntBASIC22.63■■□□□ 1.21
DDX47Q9H0S4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX47Q9H0S4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX47Q9H0S4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX47Q9H0S4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX47Q9H0S4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.63■■□□□ 1.21
DDX47Q9H0S4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
DDX47Q9H0S4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.63■■□□□ 1.21
DDX47Q9H0S4 AC021242.3-201ENST00000607598 1377 ntBASIC22.63■■□□□ 1.21
DDX47Q9H0S4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX47Q9H0S4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.62■■□□□ 1.21
DDX47Q9H0S4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX47Q9H0S4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX47Q9H0S4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX47Q9H0S4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX47Q9H0S4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.62■■□□□ 1.21
DDX47Q9H0S4 AL031848.2-201ENST00000607670 837 ntBASIC22.62■■□□□ 1.21
DDX47Q9H0S4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX47Q9H0S4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX47Q9H0S4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
DDX47Q9H0S4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX47Q9H0S4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX47Q9H0S4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX47Q9H0S4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX47Q9H0S4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX47Q9H0S4 AC009102.2-201ENST00000606772 1639 ntBASIC22.61■■□□□ 1.21
DDX47Q9H0S4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX47Q9H0S4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
DDX47Q9H0S4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX47Q9H0S4 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.61■■□□□ 1.21
DDX47Q9H0S4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX47Q9H0S4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
DDX47Q9H0S4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX47Q9H0S4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX47Q9H0S4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX47Q9H0S4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX47Q9H0S4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
DDX47Q9H0S4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.6■■□□□ 1.21
DDX47Q9H0S4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX47Q9H0S4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX47Q9H0S4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX47Q9H0S4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.6■■□□□ 1.21
DDX47Q9H0S4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.6■■□□□ 1.21
DDX47Q9H0S4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
DDX47Q9H0S4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
DDX47Q9H0S4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.59■■□□□ 1.21
DDX47Q9H0S4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DDX47Q9H0S4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
DDX47Q9H0S4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
DDX47Q9H0S4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.59■■□□□ 1.21
DDX47Q9H0S4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DDX47Q9H0S4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.59■■□□□ 1.21
DDX47Q9H0S4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DDX47Q9H0S4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
DDX47Q9H0S4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
DDX47Q9H0S4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
DDX47Q9H0S4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
DDX47Q9H0S4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.58■■□□□ 1.21
DDX47Q9H0S4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.58■■□□□ 1.21
DDX47Q9H0S4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
DDX47Q9H0S4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.58■■□□□ 1.21
DDX47Q9H0S4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
DDX47Q9H0S4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
DDX47Q9H0S4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.58■■□□□ 1.2
DDX47Q9H0S4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
DDX47Q9H0S4 AF106564.1-201ENST00000607058 2553 ntBASIC22.57■■□□□ 1.2
DDX47Q9H0S4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX47Q9H0S4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX47Q9H0S4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
DDX47Q9H0S4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX47Q9H0S4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DDX47Q9H0S4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms