Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLIRPQ9GZT3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
SLIRPQ9GZT3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLIRPQ9GZT3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLIRPQ9GZT3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLIRPQ9GZT3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLIRPQ9GZT3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLIRPQ9GZT3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLIRPQ9GZT3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.18■□□□□ 0.66
SLIRPQ9GZT3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 AL592295.1-201ENST00000400984 884 ntBASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLIRPQ9GZT3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 LINC01960-201ENST00000563759 1884 ntBASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SLIRPQ9GZT3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLIRPQ9GZT3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLIRPQ9GZT3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLIRPQ9GZT3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLIRPQ9GZT3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLIRPQ9GZT3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.15■□□□□ 0.66
SLIRPQ9GZT3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SLIRPQ9GZT3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SLIRPQ9GZT3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLIRPQ9GZT3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLIRPQ9GZT3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SLIRPQ9GZT3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SLIRPQ9GZT3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLIRPQ9GZT3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
SLIRPQ9GZT3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.14■□□□□ 0.66
SLIRPQ9GZT3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
SLIRPQ9GZT3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.14■□□□□ 0.66
SLIRPQ9GZT3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLIRPQ9GZT3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.14■□□□□ 0.66
SLIRPQ9GZT3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.14■□□□□ 0.66
SLIRPQ9GZT3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLIRPQ9GZT3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLIRPQ9GZT3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLIRPQ9GZT3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLIRPQ9GZT3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLIRPQ9GZT3 AL020996.1-203ENST00000536896 2307 ntBASIC19.14■□□□□ 0.65
SLIRPQ9GZT3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLIRPQ9GZT3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
SLIRPQ9GZT3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLIRPQ9GZT3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLIRPQ9GZT3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.14■□□□□ 0.65
SLIRPQ9GZT3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SLIRPQ9GZT3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLIRPQ9GZT3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.13■□□□□ 0.65
SLIRPQ9GZT3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLIRPQ9GZT3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.13■□□□□ 0.65
SLIRPQ9GZT3 ECEL1P2-201ENST00000461596 1295 ntBASIC19.13■□□□□ 0.65
SLIRPQ9GZT3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.13■□□□□ 0.65
SLIRPQ9GZT3 CR559946.2-201ENST00000623684 991 ntBASIC19.13■□□□□ 0.65
SLIRPQ9GZT3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLIRPQ9GZT3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms