Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LCE3DQ9BYE3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 ALDH1A3-203ENST00000557963 1670 ntBASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 RP9P-202ENST00000450133 1212 ntBASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 HR-201ENST00000312841 5351 ntTSL 5 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 AC080038.3-201ENST00000623346 1952 ntBASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC5.86□□□□□ -1.47
LCE3DQ9BYE3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 AC079630.1-202ENST00000618127 1840 ntBASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 AL157400.5-201ENST00000507624 621 ntBASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 FAM99A-202ENST00000538190 1989 ntBASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
LCE3DQ9BYE3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms