Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LIMD2Q9BT23 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 MIR6724-1-201ENST00000616420 92 ntBASIC12.85□□□□□ -0.35
LIMD2Q9BT23 MIR6724-2-201ENST00000616483 92 ntBASIC12.85□□□□□ -0.35
LIMD2Q9BT23 MIR6724-4-201ENST00000617390 92 ntBASIC12.85□□□□□ -0.35
LIMD2Q9BT23 MIR6724-3-201ENST00000622482 92 ntBASIC12.85□□□□□ -0.35
LIMD2Q9BT23 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 STK25-234ENST00000535007 2459 ntTSL 2 BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LIMD2Q9BT23 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 H19-210ENST00000439725 1929 ntTSL 2 BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 KRT16P3-201ENST00000439127 1283 ntBASIC12.84□□□□□ -0.35
LIMD2Q9BT23 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 AL353803.4-201ENST00000565882 1934 ntBASIC12.84□□□□□ -0.35
LIMD2Q9BT23 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LIMD2Q9BT23 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LIMD2Q9BT23 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LIMD2Q9BT23 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LIMD2Q9BT23 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
LIMD2Q9BT23 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 AK3-203ENST00000447596 705 ntTSL 2 BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LIMD2Q9BT23 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 HES6-204ENST00000409182 863 ntTSL 2 BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 CLTA-206ENST00000466396 695 ntTSL 2 BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms