Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTBDNQ9BSG5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RTBDNQ9BSG5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTBDNQ9BSG5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTBDNQ9BSG5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RTBDNQ9BSG5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTBDNQ9BSG5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.03■□□□□ 0.48
RTBDNQ9BSG5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 DUX4L18-201ENST00000553347 1267 ntBASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 DUX4L4-201ENST00000566884 1269 ntBASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.02■□□□□ 0.48
RTBDNQ9BSG5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTBDNQ9BSG5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.02■□□□□ 0.47
RTBDNQ9BSG5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
RTBDNQ9BSG5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTBDNQ9BSG5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RTBDNQ9BSG5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.01■□□□□ 0.47
RTBDNQ9BSG5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTBDNQ9BSG5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTBDNQ9BSG5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTBDNQ9BSG5 LINC01521-201ENST00000504184 1943 ntBASIC18.01■□□□□ 0.47
RTBDNQ9BSG5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
RTBDNQ9BSG5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTBDNQ9BSG5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTBDNQ9BSG5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTBDNQ9BSG5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.01■□□□□ 0.47
RTBDNQ9BSG5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTBDNQ9BSG5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18■□□□□ 0.47
RTBDNQ9BSG5 AL121603.2-201ENST00000557373 2117 ntBASIC18■□□□□ 0.47
RTBDNQ9BSG5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTBDNQ9BSG5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTBDNQ9BSG5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTBDNQ9BSG5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RTBDNQ9BSG5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTBDNQ9BSG5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTBDNQ9BSG5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTBDNQ9BSG5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTBDNQ9BSG5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTBDNQ9BSG5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 RARRES2P2-201ENST00000394842 485 ntBASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 PVT1_1.1-201ENST00000615125 194 ntBASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTBDNQ9BSG5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTBDNQ9BSG5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms