Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXB1Q99853 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
FOXB1Q99853 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXB1Q99853 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
FOXB1Q99853 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
FOXB1Q99853 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
FOXB1Q99853 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXB1Q99853 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXB1Q99853 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXB1Q99853 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.15■□□□□ 0.66
FOXB1Q99853 AC242852.2-201ENST00000615738 1807 ntBASIC19.15■□□□□ 0.66
FOXB1Q99853 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
FOXB1Q99853 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXB1Q99853 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXB1Q99853 AC080038.3-201ENST00000623346 1952 ntBASIC19.15■□□□□ 0.66
FOXB1Q99853 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXB1Q99853 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXB1Q99853 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
FOXB1Q99853 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
FOXB1Q99853 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXB1Q99853 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXB1Q99853 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXB1Q99853 MIR638-201ENST00000385237 100 ntBASIC19.14■□□□□ 0.65
FOXB1Q99853 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.14■□□□□ 0.65
FOXB1Q99853 SUDS3P1-201ENST00000505831 966 ntBASIC19.14■□□□□ 0.65
FOXB1Q99853 AC142381.2-201ENST00000566120 298 ntBASIC19.14■□□□□ 0.65
FOXB1Q99853 RASA4CP-201ENST00000424092 1398 ntBASIC19.14■□□□□ 0.65
FOXB1Q99853 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXB1Q99853 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.14■□□□□ 0.65
FOXB1Q99853 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXB1Q99853 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXB1Q99853 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXB1Q99853 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXB1Q99853 AC005837.3-201ENST00000612163 286 ntBASIC19.13■□□□□ 0.65
FOXB1Q99853 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXB1Q99853 AL136967.2-201ENST00000623968 743 ntBASIC19.13■□□□□ 0.65
FOXB1Q99853 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXB1Q99853 OXCT2P1-201ENST00000447263 1535 ntBASIC19.13■□□□□ 0.65
FOXB1Q99853 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.13■□□□□ 0.65
FOXB1Q99853 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
FOXB1Q99853 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXB1Q99853 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXB1Q99853 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXB1Q99853 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
FOXB1Q99853 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXB1Q99853 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXB1Q99853 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXB1Q99853 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXB1Q99853 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.12■□□□□ 0.65
FOXB1Q99853 IGHV3-19-201ENST00000521488 291 ntBASIC19.12■□□□□ 0.65
FOXB1Q99853 AC079089.2-201ENST00000531211 1277 ntBASIC19.12■□□□□ 0.65
FOXB1Q99853 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXB1Q99853 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXB1Q99853 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXB1Q99853 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXB1Q99853 AC139530.1-201ENST00000575312 1977 ntBASIC19.12■□□□□ 0.65
FOXB1Q99853 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXB1Q99853 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXB1Q99853 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXB1Q99853 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
FOXB1Q99853 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXB1Q99853 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXB1Q99853 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
FOXB1Q99853 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXB1Q99853 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXB1Q99853 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
FOXB1Q99853 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXB1Q99853 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.11■□□□□ 0.65
FOXB1Q99853 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXB1Q99853 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXB1Q99853 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
FOXB1Q99853 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXB1Q99853 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXB1Q99853 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXB1Q99853 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXB1Q99853 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.1■□□□□ 0.65
FOXB1Q99853 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXB1Q99853 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
FOXB1Q99853 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXB1Q99853 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.1■□□□□ 0.65
FOXB1Q99853 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.1■□□□□ 0.65
FOXB1Q99853 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
FOXB1Q99853 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXB1Q99853 ECEL1P1-201ENST00000373592 1742 ntBASIC19.1■□□□□ 0.65
FOXB1Q99853 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXB1Q99853 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXB1Q99853 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXB1Q99853 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXB1Q99853 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXB1Q99853 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
FOXB1Q99853 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXB1Q99853 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXB1Q99853 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXB1Q99853 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.09■□□□□ 0.65
FOXB1Q99853 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXB1Q99853 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXB1Q99853 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXB1Q99853 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXB1Q99853 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXB1Q99853 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms