Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.68■□□□□ 0.58
CSMD1Q96PZ7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSMD1Q96PZ7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 HLA-L-211ENST00000482052 1765 ntBASIC18.66■□□□□ 0.58
CSMD1Q96PZ7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 DUSP8P4-201ENST00000399538 1761 ntBASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 ESRRAP1-201ENST00000400596 1257 ntBASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD1Q96PZ7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CSMD1Q96PZ7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CSMD1Q96PZ7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSMD1Q96PZ7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSMD1Q96PZ7 AC073648.6-201ENST00000641589 218 ntBASIC18.64■□□□□ 0.57
CSMD1Q96PZ7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CSMD1Q96PZ7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSMD1Q96PZ7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CSMD1Q96PZ7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSMD1Q96PZ7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSMD1Q96PZ7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CSMD1Q96PZ7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSMD1Q96PZ7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.64■□□□□ 0.57
CSMD1Q96PZ7 AL445228.2-201ENST00000605589 952 ntBASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD1Q96PZ7 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms