Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 DUX4L7-201ENST00000630678 1275 ntBASIC16.88■□□□□ 0.29
DUX3Q96PT4 DUX4L5-201ENST00000630834 1275 ntBASIC16.88■□□□□ 0.29
DUX3Q96PT4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.88■□□□□ 0.29
DUX3Q96PT4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DUX3Q96PT4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
DUX3Q96PT4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DUX3Q96PT4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
DUX3Q96PT4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
DUX3Q96PT4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
DUX3Q96PT4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
DUX3Q96PT4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DUX3Q96PT4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.87■□□□□ 0.29
DUX3Q96PT4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DUX3Q96PT4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.87■□□□□ 0.29
DUX3Q96PT4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
DUX3Q96PT4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.87■□□□□ 0.29
DUX3Q96PT4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DUX3Q96PT4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DUX3Q96PT4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.87■□□□□ 0.29
DUX3Q96PT4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.87■□□□□ 0.29
DUX3Q96PT4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
DUX3Q96PT4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.87■□□□□ 0.29
DUX3Q96PT4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
DUX3Q96PT4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.87■□□□□ 0.29
DUX3Q96PT4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DUX3Q96PT4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
DUX3Q96PT4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DUX3Q96PT4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DUX3Q96PT4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DUX3Q96PT4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.86■□□□□ 0.29
DUX3Q96PT4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.86■□□□□ 0.29
DUX3Q96PT4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
DUX3Q96PT4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
DUX3Q96PT4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.86■□□□□ 0.29
DUX3Q96PT4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.86■□□□□ 0.29
DUX3Q96PT4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
DUX3Q96PT4 KRT18P5-201ENST00000436075 1291 ntBASIC16.86■□□□□ 0.29
DUX3Q96PT4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.86■□□□□ 0.29
DUX3Q96PT4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.86■□□□□ 0.29
DUX3Q96PT4 CCDC92B-201ENST00000575506 885 ntBASIC16.86■□□□□ 0.29
DUX3Q96PT4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.86■□□□□ 0.29
DUX3Q96PT4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DUX3Q96PT4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
DUX3Q96PT4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.86■□□□□ 0.29
DUX3Q96PT4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DUX3Q96PT4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
DUX3Q96PT4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DUX3Q96PT4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DUX3Q96PT4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DUX3Q96PT4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
DUX3Q96PT4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
DUX3Q96PT4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
DUX3Q96PT4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.85■□□□□ 0.29
DUX3Q96PT4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DUX3Q96PT4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
DUX3Q96PT4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
DUX3Q96PT4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.85■□□□□ 0.29
DUX3Q96PT4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DUX3Q96PT4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.85■□□□□ 0.29
DUX3Q96PT4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DUX3Q96PT4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.85■□□□□ 0.29
DUX3Q96PT4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DUX3Q96PT4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.85■□□□□ 0.29
DUX3Q96PT4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.85■□□□□ 0.29
DUX3Q96PT4 IKBKGP1-201ENST00000612193 1073 ntBASIC16.85■□□□□ 0.29
DUX3Q96PT4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DUX3Q96PT4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.85■□□□□ 0.29
DUX3Q96PT4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
DUX3Q96PT4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DUX3Q96PT4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.85■□□□□ 0.29
DUX3Q96PT4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DUX3Q96PT4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.85■□□□□ 0.29
DUX3Q96PT4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DUX3Q96PT4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
DUX3Q96PT4 AC092068.2-201ENST00000590491 1708 ntBASIC16.84■□□□□ 0.29
DUX3Q96PT4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DUX3Q96PT4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.84■□□□□ 0.29
DUX3Q96PT4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
DUX3Q96PT4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
DUX3Q96PT4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DUX3Q96PT4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.84■□□□□ 0.29
DUX3Q96PT4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DUX3Q96PT4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DUX3Q96PT4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.84■□□□□ 0.29
DUX3Q96PT4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.84■□□□□ 0.29
DUX3Q96PT4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
DUX3Q96PT4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DUX3Q96PT4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.84■□□□□ 0.29
DUX3Q96PT4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
DUX3Q96PT4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DUX3Q96PT4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
DUX3Q96PT4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DUX3Q96PT4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.83■□□□□ 0.28
DUX3Q96PT4 AC123595.1-201ENST00000440769 1046 ntBASIC16.83■□□□□ 0.28
DUX3Q96PT4 KRT18P14-201ENST00000534205 1250 ntBASIC16.83■□□□□ 0.28
DUX3Q96PT4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.83■□□□□ 0.28
DUX3Q96PT4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.83■□□□□ 0.28
DUX3Q96PT4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
DUX3Q96PT4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.83■□□□□ 0.28
DUX3Q96PT4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms