Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.86■□□□□ 0.93
CNTNAP3BQ96NU0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.86■□□□□ 0.93
CNTNAP3BQ96NU0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.86■□□□□ 0.93
CNTNAP3BQ96NU0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 MKRN4P-201ENST00000444706 1521 ntBASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 ARMC10P1-201ENST00000313754 855 ntBASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 KRT18P35-201ENST00000510488 1269 ntBASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.85■□□□□ 0.93
CNTNAP3BQ96NU0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP3BQ96NU0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP3BQ96NU0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.84■□□□□ 0.93
CNTNAP3BQ96NU0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP3BQ96NU0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP3BQ96NU0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CNTNAP3BQ96NU0 AL359736.2-201ENST00000621992 437 ntBASIC20.84■□□□□ 0.93
CNTNAP3BQ96NU0 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.84■□□□□ 0.93
CNTNAP3BQ96NU0 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.84■□□□□ 0.93
CNTNAP3BQ96NU0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP3BQ96NU0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CNTNAP3BQ96NU0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP3BQ96NU0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP3BQ96NU0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.83■□□□□ 0.93
CNTNAP3BQ96NU0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTNAP3BQ96NU0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CNTNAP3BQ96NU0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CNTNAP3BQ96NU0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP3BQ96NU0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CNTNAP3BQ96NU0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.83■□□□□ 0.93
CNTNAP3BQ96NU0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP3BQ96NU0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP3BQ96NU0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
CNTNAP3BQ96NU0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.83■□□□□ 0.92
CNTNAP3BQ96NU0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 AC104187.1-201ENST00000607510 612 ntBASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 MYCNOS-205ENST00000641950 531 ntBASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3BQ96NU0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 AL022069.1-201ENST00000568025 1636 ntBASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3BQ96NU0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 BX088651.1-201ENST00000540551 451 ntBASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.8■□□□□ 0.92
CNTNAP3BQ96NU0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms