Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 TPRG1LP1-201ENST00000598702 760 ntBASIC17.71■□□□□ 0.43
ZNF48Q96MX3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF48Q96MX3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ZNF48Q96MX3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ZNF48Q96MX3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF48Q96MX3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF48Q96MX3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF48Q96MX3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF48Q96MX3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.7■□□□□ 0.42
ZNF48Q96MX3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.7■□□□□ 0.42
ZNF48Q96MX3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF48Q96MX3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
ZNF48Q96MX3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF48Q96MX3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF48Q96MX3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF48Q96MX3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF48Q96MX3 AL353803.4-201ENST00000565882 1934 ntBASIC17.7■□□□□ 0.42
ZNF48Q96MX3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
ZNF48Q96MX3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF48Q96MX3 DUSP8P3-201ENST00000399571 1760 ntBASIC17.68■□□□□ 0.42
ZNF48Q96MX3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.68■□□□□ 0.42
ZNF48Q96MX3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF48Q96MX3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF48Q96MX3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.68■□□□□ 0.42
ZNF48Q96MX3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.68■□□□□ 0.42
ZNF48Q96MX3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
ZNF48Q96MX3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF48Q96MX3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.68■□□□□ 0.42
ZNF48Q96MX3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF48Q96MX3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF48Q96MX3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF48Q96MX3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF48Q96MX3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ZNF48Q96MX3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF48Q96MX3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF48Q96MX3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF48Q96MX3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF48Q96MX3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF48Q96MX3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
ZNF48Q96MX3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF48Q96MX3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF48Q96MX3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ZNF48Q96MX3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ZNF48Q96MX3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF48Q96MX3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.65■□□□□ 0.42
ZNF48Q96MX3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms