Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LINC00479Q96M42 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LINC00479Q96M42 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.58■□□□□ 0.25
LINC00479Q96M42 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.58■□□□□ 0.24
LINC00479Q96M42 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.58■□□□□ 0.24
LINC00479Q96M42 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LINC00479Q96M42 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LINC00479Q96M42 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00479Q96M42 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.58■□□□□ 0.24
LINC00479Q96M42 LINC01529-204ENST00000636474 1715 ntBASIC16.58■□□□□ 0.24
LINC00479Q96M42 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00479Q96M42 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00479Q96M42 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00479Q96M42 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINC00479Q96M42 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00479Q96M42 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
LINC00479Q96M42 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00479Q96M42 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00479Q96M42 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LINC00479Q96M42 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00479Q96M42 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00479Q96M42 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00479Q96M42 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LINC00479Q96M42 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00479Q96M42 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.57■□□□□ 0.24
LINC00479Q96M42 AC139795.1-202ENST00000500444 432 ntBASIC16.57■□□□□ 0.24
LINC00479Q96M42 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00479Q96M42 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.57■□□□□ 0.24
LINC00479Q96M42 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.57■□□□□ 0.24
LINC00479Q96M42 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.57■□□□□ 0.24
LINC00479Q96M42 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00479Q96M42 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINC00479Q96M42 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LINC00479Q96M42 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LINC00479Q96M42 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC00479Q96M42 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
LINC00479Q96M42 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC00479Q96M42 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC00479Q96M42 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.56■□□□□ 0.24
LINC00479Q96M42 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.56■□□□□ 0.24
LINC00479Q96M42 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00479Q96M42 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.56■□□□□ 0.24
LINC00479Q96M42 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.56■□□□□ 0.24
LINC00479Q96M42 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LINC00479Q96M42 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00479Q96M42 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00479Q96M42 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00479Q96M42 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00479Q96M42 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00479Q96M42 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00479Q96M42 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00479Q96M42 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LINC00479Q96M42 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINC00479Q96M42 Z98882.1-201ENST00000622160 2253 ntBASIC16.56■□□□□ 0.24
LINC00479Q96M42 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00479Q96M42 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00479Q96M42 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00479Q96M42 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00479Q96M42 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00479Q96M42 KRT18P60-201ENST00000312876 1297 ntBASIC16.55■□□□□ 0.24
LINC00479Q96M42 DUX4L18-201ENST00000553347 1267 ntBASIC16.55■□□□□ 0.24
LINC00479Q96M42 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LINC00479Q96M42 THA1P-201ENST00000590384 1145 ntBASIC16.55■□□□□ 0.24
LINC00479Q96M42 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.55■□□□□ 0.24
LINC00479Q96M42 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00479Q96M42 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LINC00479Q96M42 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00479Q96M42 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LINC00479Q96M42 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINC00479Q96M42 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00479Q96M42 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00479Q96M42 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00479Q96M42 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.54■□□□□ 0.24
LINC00479Q96M42 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00479Q96M42 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00479Q96M42 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00479Q96M42 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LINC00479Q96M42 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC00479Q96M42 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00479Q96M42 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.54■□□□□ 0.24
LINC00479Q96M42 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LINC00479Q96M42 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00479Q96M42 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00479Q96M42 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00479Q96M42 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00479Q96M42 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC00479Q96M42 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC00479Q96M42 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LINC00479Q96M42 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00479Q96M42 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00479Q96M42 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00479Q96M42 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00479Q96M42 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00479Q96M42 KRT18P24-201ENST00000344739 1156 ntBASIC16.53■□□□□ 0.24
LINC00479Q96M42 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00479Q96M42 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.53■□□□□ 0.24
LINC00479Q96M42 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00479Q96M42 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms