Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 MIR639-201ENST00000384974 98 ntBASIC20.86■□□□□ 0.93
CLPTM1LQ96KA5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CLPTM1LQ96KA5 MIR6765-201ENST00000614092 87 ntBASIC20.86■□□□□ 0.93
CLPTM1LQ96KA5 LINC01006-201ENST00000333319 2292 ntBASIC20.86■□□□□ 0.93
CLPTM1LQ96KA5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 GPX1-201ENST00000419349 1106 ntBASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLPTM1LQ96KA5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
CLPTM1LQ96KA5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPTM1LQ96KA5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLPTM1LQ96KA5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLPTM1LQ96KA5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CLPTM1LQ96KA5 DUX4L9-201ENST00000449051 1259 ntBASIC20.84■□□□□ 0.93
CLPTM1LQ96KA5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLPTM1LQ96KA5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.84■□□□□ 0.93
CLPTM1LQ96KA5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CLPTM1LQ96KA5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPTM1LQ96KA5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPTM1LQ96KA5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLPTM1LQ96KA5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLPTM1LQ96KA5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.83■□□□□ 0.93
CLPTM1LQ96KA5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.83■□□□□ 0.93
CLPTM1LQ96KA5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLPTM1LQ96KA5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLPTM1LQ96KA5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLPTM1LQ96KA5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.83■□□□□ 0.92
CLPTM1LQ96KA5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLPTM1LQ96KA5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLPTM1LQ96KA5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLPTM1LQ96KA5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLPTM1LQ96KA5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLPTM1LQ96KA5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLPTM1LQ96KA5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLPTM1LQ96KA5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLPTM1LQ96KA5 AF131216.4-201ENST00000638924 1588 ntBASIC20.82■□□□□ 0.92
CLPTM1LQ96KA5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.82■□□□□ 0.92
CLPTM1LQ96KA5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.82■□□□□ 0.92
CLPTM1LQ96KA5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLPTM1LQ96KA5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLPTM1LQ96KA5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLPTM1LQ96KA5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLPTM1LQ96KA5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLPTM1LQ96KA5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CLPTM1LQ96KA5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLPTM1LQ96KA5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPTM1LQ96KA5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPTM1LQ96KA5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLPTM1LQ96KA5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPTM1LQ96KA5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPTM1LQ96KA5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPTM1LQ96KA5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPTM1LQ96KA5 AC004448.1-201ENST00000458332 883 ntBASIC20.81■□□□□ 0.92
CLPTM1LQ96KA5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.81■□□□□ 0.92
CLPTM1LQ96KA5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPTM1LQ96KA5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPTM1LQ96KA5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CLPTM1LQ96KA5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPTM1LQ96KA5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 AL391422.3-201ENST00000603791 2761 ntBASIC20.8■□□□□ 0.92
CLPTM1LQ96KA5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1LQ96KA5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1LQ96KA5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLPTM1LQ96KA5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLPTM1LQ96KA5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.79■□□□□ 0.92
CLPTM1LQ96KA5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1LQ96KA5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.79■□□□□ 0.92
CLPTM1LQ96KA5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.79■□□□□ 0.92
CLPTM1LQ96KA5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLPTM1LQ96KA5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms