Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF31Q96EP0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF31Q96EP0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF31Q96EP0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF31Q96EP0 NTF6G-201ENST00000591094 616 ntBASIC20.92■□□□□ 0.94
RNF31Q96EP0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF31Q96EP0 AL137784.2-201ENST00000607332 1000 ntBASIC20.92■□□□□ 0.94
RNF31Q96EP0 AL354811.1-201ENST00000610286 706 ntBASIC20.92■□□□□ 0.94
RNF31Q96EP0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RNF31Q96EP0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF31Q96EP0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF31Q96EP0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RNF31Q96EP0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF31Q96EP0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.92■□□□□ 0.94
RNF31Q96EP0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF31Q96EP0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF31Q96EP0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF31Q96EP0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF31Q96EP0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RNF31Q96EP0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF31Q96EP0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF31Q96EP0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF31Q96EP0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF31Q96EP0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF31Q96EP0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF31Q96EP0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF31Q96EP0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF31Q96EP0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF31Q96EP0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.91■□□□□ 0.94
RNF31Q96EP0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF31Q96EP0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF31Q96EP0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF31Q96EP0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF31Q96EP0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF31Q96EP0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF31Q96EP0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.9■□□□□ 0.94
RNF31Q96EP0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF31Q96EP0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RNF31Q96EP0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF31Q96EP0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF31Q96EP0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RNF31Q96EP0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF31Q96EP0 RARRES2P11-201ENST00000635158 484 ntBASIC20.9■□□□□ 0.94
RNF31Q96EP0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF31Q96EP0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.89■□□□□ 0.94
RNF31Q96EP0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
RNF31Q96EP0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
RNF31Q96EP0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
RNF31Q96EP0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF31Q96EP0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF31Q96EP0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF31Q96EP0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF31Q96EP0 KRT18P61-201ENST00000585825 1298 ntBASIC20.89■□□□□ 0.93
RNF31Q96EP0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
RNF31Q96EP0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF31Q96EP0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
RNF31Q96EP0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF31Q96EP0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF31Q96EP0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF31Q96EP0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
RNF31Q96EP0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF31Q96EP0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF31Q96EP0 AC123595.1-201ENST00000440769 1046 ntBASIC20.88■□□□□ 0.93
RNF31Q96EP0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF31Q96EP0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF31Q96EP0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF31Q96EP0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RNF31Q96EP0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.88■□□□□ 0.93
RNF31Q96EP0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RNF31Q96EP0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RNF31Q96EP0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF31Q96EP0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF31Q96EP0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF31Q96EP0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF31Q96EP0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF31Q96EP0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF31Q96EP0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF31Q96EP0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF31Q96EP0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF31Q96EP0 AP005435.1-201ENST00000529293 1178 ntBASIC20.87■□□□□ 0.93
RNF31Q96EP0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF31Q96EP0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF31Q96EP0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF31Q96EP0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RNF31Q96EP0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms