Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 AL136116.3-201ENST00000402907 1138 ntBASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 AC131212.1-201ENST00000613771 668 ntBASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.22■□□□□ 0.99
RHBDF1Q96CC6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RHBDF1Q96CC6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RHBDF1Q96CC6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RHBDF1Q96CC6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.21■□□□□ 0.99
RHBDF1Q96CC6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.21■□□□□ 0.99
RHBDF1Q96CC6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RHBDF1Q96CC6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RHBDF1Q96CC6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.21■□□□□ 0.99
RHBDF1Q96CC6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.21■□□□□ 0.99
RHBDF1Q96CC6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RHBDF1Q96CC6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RHBDF1Q96CC6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDF1Q96CC6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDF1Q96CC6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDF1Q96CC6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDF1Q96CC6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.2■□□□□ 0.98
RHBDF1Q96CC6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDF1Q96CC6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RHBDF1Q96CC6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.2■□□□□ 0.98
RHBDF1Q96CC6 AC010525.1-201ENST00000585559 441 ntBASIC21.2■□□□□ 0.98
RHBDF1Q96CC6 AC011298.3-201ENST00000615796 283 ntBASIC21.2■□□□□ 0.98
RHBDF1Q96CC6 AC136469.2-201ENST00000623944 1028 ntBASIC21.2■□□□□ 0.98
RHBDF1Q96CC6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDF1Q96CC6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHBDF1Q96CC6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDF1Q96CC6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RHBDF1Q96CC6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDF1Q96CC6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDF1Q96CC6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDF1Q96CC6 AC068587.7-201ENST00000641602 218 ntBASIC21.19■□□□□ 0.98
RHBDF1Q96CC6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDF1Q96CC6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDF1Q96CC6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDF1Q96CC6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDF1Q96CC6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
RHBDF1Q96CC6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDF1Q96CC6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RHBDF1Q96CC6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RHBDF1Q96CC6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RHBDF1Q96CC6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.16■□□□□ 0.98
RHBDF1Q96CC6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RHBDF1Q96CC6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.16■□□□□ 0.98
RHBDF1Q96CC6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RHBDF1Q96CC6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHBDF1Q96CC6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHBDF1Q96CC6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms