Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS33AQ96AX1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.86■□□□□ 0.93
VPS33AQ96AX1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS33AQ96AX1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.86■□□□□ 0.93
VPS33AQ96AX1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.85■□□□□ 0.93
VPS33AQ96AX1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.85■□□□□ 0.93
VPS33AQ96AX1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS33AQ96AX1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS33AQ96AX1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
VPS33AQ96AX1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.85■□□□□ 0.93
VPS33AQ96AX1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS33AQ96AX1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.85■□□□□ 0.93
VPS33AQ96AX1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS33AQ96AX1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
VPS33AQ96AX1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS33AQ96AX1 AC009102.2-201ENST00000606772 1639 ntBASIC20.84■□□□□ 0.93
VPS33AQ96AX1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS33AQ96AX1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS33AQ96AX1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS33AQ96AX1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS33AQ96AX1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS33AQ96AX1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VPS33AQ96AX1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS33AQ96AX1 BX664725.1-201ENST00000438252 379 ntBASIC20.83■□□□□ 0.93
VPS33AQ96AX1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.83■□□□□ 0.93
VPS33AQ96AX1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS33AQ96AX1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
VPS33AQ96AX1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
VPS33AQ96AX1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
VPS33AQ96AX1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS33AQ96AX1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VPS33AQ96AX1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.81■□□□□ 0.92
VPS33AQ96AX1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
VPS33AQ96AX1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
VPS33AQ96AX1 AC005229.4-201ENST00000610085 2198 ntBASIC20.81■□□□□ 0.92
VPS33AQ96AX1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VPS33AQ96AX1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.81■□□□□ 0.92
VPS33AQ96AX1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
VPS33AQ96AX1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.81■□□□□ 0.92
VPS33AQ96AX1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.8■□□□□ 0.92
VPS33AQ96AX1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS33AQ96AX1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.8■□□□□ 0.92
VPS33AQ96AX1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.8■□□□□ 0.92
VPS33AQ96AX1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VPS33AQ96AX1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.8■□□□□ 0.92
VPS33AQ96AX1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.8■□□□□ 0.92
VPS33AQ96AX1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VPS33AQ96AX1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS33AQ96AX1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
VPS33AQ96AX1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.79■□□□□ 0.92
VPS33AQ96AX1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS33AQ96AX1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS33AQ96AX1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.79■□□□□ 0.92
VPS33AQ96AX1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS33AQ96AX1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
VPS33AQ96AX1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VPS33AQ96AX1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.79■□□□□ 0.92
VPS33AQ96AX1 AC092028.1-203ENST00000608262 953 ntBASIC20.79■□□□□ 0.92
VPS33AQ96AX1 CA15P2-201ENST00000611168 834 ntBASIC20.79■□□□□ 0.92
VPS33AQ96AX1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VPS33AQ96AX1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms