Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RPGRQ92834 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.04■■□□□ 1.92
RPGRQ92834 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RPGRQ92834 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RPGRQ92834 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RPGRQ92834 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RPGRQ92834 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RPGRQ92834 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RPGRQ92834 DUSP8P3-201ENST00000399571 1760 ntBASIC27.03■■□□□ 1.92
RPGRQ92834 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.03■■□□□ 1.92
RPGRQ92834 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC27.03■■□□□ 1.92
RPGRQ92834 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC27.03■■□□□ 1.92
RPGRQ92834 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC27.03■■□□□ 1.92
RPGRQ92834 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RPGRQ92834 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRQ92834 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.02■■□□□ 1.92
RPGRQ92834 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRQ92834 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRQ92834 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
RPGRQ92834 MAZ-216ENST00000616501 991 ntTSL 5 BASIC27.02■■□□□ 1.92
RPGRQ92834 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRQ92834 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RPGRQ92834 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.92
RPGRQ92834 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
RPGRQ92834 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC27.01■■□□□ 1.91
RPGRQ92834 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
RPGRQ92834 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC27.01■■□□□ 1.91
RPGRQ92834 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.01■■□□□ 1.91
RPGRQ92834 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC27.01■■□□□ 1.91
RPGRQ92834 AL121832.2-201ENST00000610979 668 ntBASIC27.01■■□□□ 1.91
RPGRQ92834 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
RPGRQ92834 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RPGRQ92834 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
RPGRQ92834 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
RPGRQ92834 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1.91
RPGRQ92834 PARP1-202ENST00000366792 553 ntTSL 3 BASIC27■■□□□ 1.91
RPGRQ92834 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RPGRQ92834 APTR-205ENST00000447009 902 ntTSL 2 BASIC27■■□□□ 1.91
RPGRQ92834 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
RPGRQ92834 AL050303.2-201ENST00000619798 666 ntBASIC27■■□□□ 1.91
RPGRQ92834 AC231657.2-201ENST00000624556 255 ntBASIC27■■□□□ 1.91
RPGRQ92834 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
RPGRQ92834 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
RPGRQ92834 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1.91
RPGRQ92834 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
RPGRQ92834 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27■■□□□ 1.91
RPGRQ92834 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RPGRQ92834 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.99■■□□□ 1.91
RPGRQ92834 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RPGRQ92834 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.99■■□□□ 1.91
RPGRQ92834 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RPGRQ92834 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC26.99■■□□□ 1.91
RPGRQ92834 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
RPGRQ92834 UBE2DNL-204ENST00000602536 740 ntBASIC26.99■■□□□ 1.91
RPGRQ92834 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC26.99■■□□□ 1.91
RPGRQ92834 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.99■■□□□ 1.91
RPGRQ92834 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RPGRQ92834 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RPGRQ92834 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RPGRQ92834 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.98■■□□□ 1.91
RPGRQ92834 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC26.98■■□□□ 1.91
RPGRQ92834 AC083906.2-201ENST00000511578 360 ntBASIC26.98■■□□□ 1.91
RPGRQ92834 CD99P1-205ENST00000527459 561 ntBASIC26.98■■□□□ 1.91
RPGRQ92834 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RPGRQ92834 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC26.98■■□□□ 1.91
RPGRQ92834 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RPGRQ92834 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.97■■□□□ 1.91
RPGRQ92834 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.97■■□□□ 1.91
RPGRQ92834 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.97■■□□□ 1.91
RPGRQ92834 AC007322.1-201ENST00000426983 750 ntBASIC26.97■■□□□ 1.91
RPGRQ92834 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RPGRQ92834 DUX4L16-201ENST00000555130 1264 ntBASIC26.97■■□□□ 1.91
RPGRQ92834 AC142086.2-201ENST00000569753 217 ntBASIC26.97■■□□□ 1.91
RPGRQ92834 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC26.97■■□□□ 1.91
RPGRQ92834 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.97■■□□□ 1.91
RPGRQ92834 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.97■■□□□ 1.91
RPGRQ92834 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RPGRQ92834 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RPGRQ92834 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
RPGRQ92834 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RPGRQ92834 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.96■■□□□ 1.91
RPGRQ92834 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RPGRQ92834 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
RPGRQ92834 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RPGRQ92834 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.96■■□□□ 1.91
RPGRQ92834 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC26.96■■□□□ 1.91
RPGRQ92834 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC26.96■■□□□ 1.91
RPGRQ92834 AC005181.1-201ENST00000604782 1256 ntBASIC26.96■■□□□ 1.91
RPGRQ92834 TMEM191A-211ENST00000637163 1067 ntBASIC26.96■■□□□ 1.91
RPGRQ92834 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RPGRQ92834 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.96■■□□□ 1.91
RPGRQ92834 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RPGRQ92834 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
RPGRQ92834 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
RPGRQ92834 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
RPGRQ92834 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC26.95■■□□□ 1.91
RPGRQ92834 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.95■■□□□ 1.9
RPGRQ92834 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.95■■□□□ 1.9
RPGRQ92834 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RPGRQ92834 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms