Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
PTPRUQ92729 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PTPRUQ92729 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
PTPRUQ92729 AC093827.2-201ENST00000512654 315 ntBASIC30.8■■■□□ 2.52
PTPRUQ92729 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PTPRUQ92729 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PTPRUQ92729 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PTPRUQ92729 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PTPRUQ92729 SLC29A4P1-201ENST00000398760 971 ntBASIC30.79■■■□□ 2.52
PTPRUQ92729 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC30.79■■■□□ 2.52
PTPRUQ92729 AC073210.2-201ENST00000430369 194 ntBASIC30.79■■■□□ 2.52
PTPRUQ92729 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PTPRUQ92729 DET1-205ENST00000558413 583 ntTSL 4 BASIC30.79■■■□□ 2.52
PTPRUQ92729 AL353803.4-201ENST00000565882 1934 ntBASIC30.78■■■□□ 2.52
PTPRUQ92729 RGMA-211ENST00000557420 989 ntTSL 3 BASIC30.78■■■□□ 2.52
PTPRUQ92729 PFKL-212ENST00000628044 129 ntTSL 3 BASIC30.78■■■□□ 2.52
PTPRUQ92729 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
PTPRUQ92729 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PTPRUQ92729 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PTPRUQ92729 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC30.77■■■□□ 2.52
PTPRUQ92729 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PTPRUQ92729 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PTPRUQ92729 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC30.76■■■□□ 2.52
PTPRUQ92729 AC142381.3-201ENST00000568208 1670 ntBASIC30.76■■■□□ 2.52
PTPRUQ92729 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
PTPRUQ92729 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
PTPRUQ92729 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
PTPRUQ92729 EED-207ENST00000528180 1745 ntTSL 5 BASIC30.76■■■□□ 2.51
PTPRUQ92729 H19-210ENST00000439725 1929 ntTSL 2 BASIC30.76■■■□□ 2.51
PTPRUQ92729 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
PTPRUQ92729 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
PTPRUQ92729 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTPRUQ92729 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTPRUQ92729 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
PTPRUQ92729 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTPRUQ92729 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC30.75■■■□□ 2.51
PTPRUQ92729 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC30.75■■■□□ 2.51
PTPRUQ92729 TBCB-214ENST00000629269 413 ntTSL 5 BASIC30.75■■■□□ 2.51
PTPRUQ92729 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTPRUQ92729 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTPRUQ92729 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PTPRUQ92729 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PTPRUQ92729 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PTPRUQ92729 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC30.74■■■□□ 2.51
PTPRUQ92729 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC30.74■■■□□ 2.51
PTPRUQ92729 AP001160.3-201ENST00000601484 763 ntBASIC30.74■■■□□ 2.51
PTPRUQ92729 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
PTPRUQ92729 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PTPRUQ92729 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PTPRUQ92729 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
PTPRUQ92729 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC30.74■■■□□ 2.51
PTPRUQ92729 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC30.73■■■□□ 2.51
PTPRUQ92729 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC30.73■■■□□ 2.51
PTPRUQ92729 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC30.73■■■□□ 2.51
PTPRUQ92729 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
PTPRUQ92729 DUSP8P3-201ENST00000399571 1760 ntBASIC30.73■■■□□ 2.51
PTPRUQ92729 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PTPRUQ92729 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC30.73■■■□□ 2.51
PTPRUQ92729 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC30.73■■■□□ 2.51
PTPRUQ92729 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PTPRUQ92729 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PTPRUQ92729 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PTPRUQ92729 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PTPRUQ92729 AF201337.1-201ENST00000520239 748 ntBASIC30.73■■■□□ 2.51
PTPRUQ92729 AC133552.2-202ENST00000575694 574 ntBASIC30.73■■■□□ 2.51
PTPRUQ92729 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC30.73■■■□□ 2.51
PTPRUQ92729 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PTPRUQ92729 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PTPRUQ92729 LINC00543-201ENST00000567234 1845 ntBASIC30.72■■■□□ 2.51
PTPRUQ92729 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PTPRUQ92729 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
PTPRUQ92729 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.72■■■□□ 2.51
PTPRUQ92729 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC30.72■■■□□ 2.51
PTPRUQ92729 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PTPRUQ92729 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC30.72■■■□□ 2.51
PTPRUQ92729 AC133041.1-202ENST00000642053 222 ntBASIC30.72■■■□□ 2.51
PTPRUQ92729 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC30.71■■■□□ 2.51
PTPRUQ92729 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
PTPRUQ92729 AC009237.3-201ENST00000393279 1427 ntBASIC30.71■■■□□ 2.51
PTPRUQ92729 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC30.71■■■□□ 2.51
PTPRUQ92729 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PTPRUQ92729 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC30.7■■■□□ 2.51
PTPRUQ92729 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
PTPRUQ92729 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
PTPRUQ92729 MFF-207ENST00000409565 1548 ntTSL 2 BASIC30.7■■■□□ 2.51
PTPRUQ92729 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
PTPRUQ92729 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PTPRUQ92729 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
PTPRUQ92729 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
PTPRUQ92729 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
PTPRUQ92729 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PTPRUQ92729 FAM201B-201ENST00000458407 597 ntBASIC30.69■■■□□ 2.5
PTPRUQ92729 AC105036.2-201ENST00000569468 176 ntBASIC30.69■■■□□ 2.5
PTPRUQ92729 MARS-234ENST00000630571 216 ntTSL 5 BASIC30.69■■■□□ 2.5
PTPRUQ92729 MARS-235ENST00000630803 183 ntTSL 3 BASIC30.69■■■□□ 2.5
PTPRUQ92729 AC055733.4-201ENST00000638462 1354 ntBASIC30.69■■■□□ 2.5
PTPRUQ92729 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PTPRUQ92729 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
PTPRUQ92729 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PTPRUQ92729 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms