Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 AC087393.1-201ENST00000582896 145 ntBASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
MBD3L1Q8WWY6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
MBD3L1Q8WWY6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 AC016575.1-201ENST00000607026 382 ntBASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MBD3L1Q8WWY6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L1Q8WWY6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L1Q8WWY6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L1Q8WWY6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.03■□□□□ 0.32
MBD3L1Q8WWY6 AC022413.1-201ENST00000624602 984 ntBASIC17.03■□□□□ 0.32
MBD3L1Q8WWY6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L1Q8WWY6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L1Q8WWY6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L1Q8WWY6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L1Q8WWY6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.03■□□□□ 0.32
MBD3L1Q8WWY6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MBD3L1Q8WWY6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD3L1Q8WWY6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.02■□□□□ 0.32
MBD3L1Q8WWY6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
MBD3L1Q8WWY6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.02■□□□□ 0.32
MBD3L1Q8WWY6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.02■□□□□ 0.32
MBD3L1Q8WWY6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MBD3L1Q8WWY6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD3L1Q8WWY6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD3L1Q8WWY6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
MBD3L1Q8WWY6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
MBD3L1Q8WWY6 FEM1AP1-201ENST00000431297 1995 ntBASIC17.02■□□□□ 0.31
MBD3L1Q8WWY6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MBD3L1Q8WWY6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
MBD3L1Q8WWY6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MBD3L1Q8WWY6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MBD3L1Q8WWY6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MBD3L1Q8WWY6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L1Q8WWY6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms