Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM40Q8WWA1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM40Q8WWA1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM40Q8WWA1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM40Q8WWA1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.83■■□□□ 1.41
TMEM40Q8WWA1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM40Q8WWA1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.83■■□□□ 1.41
TMEM40Q8WWA1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM40Q8WWA1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM40Q8WWA1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.83■■□□□ 1.41
TMEM40Q8WWA1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM40Q8WWA1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM40Q8WWA1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
TMEM40Q8WWA1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
TMEM40Q8WWA1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM40Q8WWA1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.82■■□□□ 1.4
TMEM40Q8WWA1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TMEM40Q8WWA1 RAP2CP1-201ENST00000605103 478 ntBASIC23.82■■□□□ 1.4
TMEM40Q8WWA1 AC080038.1-201ENST00000611274 1154 ntBASIC23.82■■□□□ 1.4
TMEM40Q8WWA1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
TMEM40Q8WWA1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.82■■□□□ 1.4
TMEM40Q8WWA1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM40Q8WWA1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.81■■□□□ 1.4
TMEM40Q8WWA1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.81■■□□□ 1.4
TMEM40Q8WWA1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM40Q8WWA1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM40Q8WWA1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM40Q8WWA1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM40Q8WWA1 AC016769.1-201ENST00000409132 1010 ntBASIC23.81■■□□□ 1.4
TMEM40Q8WWA1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.81■■□□□ 1.4
TMEM40Q8WWA1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TMEM40Q8WWA1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.81■■□□□ 1.4
TMEM40Q8WWA1 LINC01960-201ENST00000563759 1884 ntBASIC23.81■■□□□ 1.4
TMEM40Q8WWA1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM40Q8WWA1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM40Q8WWA1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 AC005224.4-201ENST00000583262 1652 ntBASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 AC079140.4-201ENST00000507448 529 ntBASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
TMEM40Q8WWA1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TMEM40Q8WWA1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM40Q8WWA1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM40Q8WWA1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.79■■□□□ 1.4
TMEM40Q8WWA1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM40Q8WWA1 ID1-201ENST00000376105 1233 ntBASIC23.79■■□□□ 1.4
TMEM40Q8WWA1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM40Q8WWA1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.79■■□□□ 1.4
TMEM40Q8WWA1 CDCA4P2-201ENST00000441182 718 ntBASIC23.79■■□□□ 1.4
TMEM40Q8WWA1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM40Q8WWA1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.79■■□□□ 1.4
TMEM40Q8WWA1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.79■■□□□ 1.4
TMEM40Q8WWA1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM40Q8WWA1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM40Q8WWA1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.78■■□□□ 1.4
TMEM40Q8WWA1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.78■■□□□ 1.4
TMEM40Q8WWA1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.78■■□□□ 1.4
TMEM40Q8WWA1 AC073111.5-205ENST00000641717 521 ntBASIC23.78■■□□□ 1.4
TMEM40Q8WWA1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
TMEM40Q8WWA1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM40Q8WWA1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TMEM40Q8WWA1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM40Q8WWA1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
TMEM40Q8WWA1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM40Q8WWA1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM40Q8WWA1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM40Q8WWA1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM40Q8WWA1 KRT19P1-201ENST00000405746 1186 ntBASIC23.77■■□□□ 1.4
TMEM40Q8WWA1 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.77■■□□□ 1.4
TMEM40Q8WWA1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.77■■□□□ 1.4
TMEM40Q8WWA1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.77■■□□□ 1.4
TMEM40Q8WWA1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.77■■□□□ 1.4
TMEM40Q8WWA1 AC093323.1-202ENST00000635031 2045 ntBASIC23.77■■□□□ 1.4
TMEM40Q8WWA1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.77■■□□□ 1.4
TMEM40Q8WWA1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
TMEM40Q8WWA1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM40Q8WWA1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM40Q8WWA1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM40Q8WWA1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.76■■□□□ 1.39
TMEM40Q8WWA1 DUSP8P5-201ENST00000422884 1815 ntBASIC23.75■■□□□ 1.39
TMEM40Q8WWA1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM40Q8WWA1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM40Q8WWA1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM40Q8WWA1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM40Q8WWA1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
TMEM40Q8WWA1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM40Q8WWA1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM40Q8WWA1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM40Q8WWA1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.75■■□□□ 1.39
TMEM40Q8WWA1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.74■■□□□ 1.39
TMEM40Q8WWA1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms