Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CHD6Q8TD26 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD6Q8TD26 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD6Q8TD26 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD6Q8TD26 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD6Q8TD26 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.07■□□□□ 0.8
CHD6Q8TD26 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CHD6Q8TD26 AP001160.3-201ENST00000601484 763 ntBASIC20.07■□□□□ 0.8
CHD6Q8TD26 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD6Q8TD26 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CHD6Q8TD26 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.07■□□□□ 0.8
CHD6Q8TD26 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD6Q8TD26 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD6Q8TD26 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD6Q8TD26 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD6Q8TD26 AL512625.2-201ENST00000417533 625 ntBASIC20.06■□□□□ 0.8
CHD6Q8TD26 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.06■□□□□ 0.8
CHD6Q8TD26 C1QBPP2-201ENST00000528754 825 ntBASIC20.06■□□□□ 0.8
CHD6Q8TD26 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.06■□□□□ 0.8
CHD6Q8TD26 CYP2T3P-201ENST00000601990 817 ntBASIC20.06■□□□□ 0.8
CHD6Q8TD26 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD6Q8TD26 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD6Q8TD26 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD6Q8TD26 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD6Q8TD26 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD6Q8TD26 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD6Q8TD26 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CHD6Q8TD26 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.05■□□□□ 0.8
CHD6Q8TD26 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD6Q8TD26 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CHD6Q8TD26 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD6Q8TD26 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.05■□□□□ 0.8
CHD6Q8TD26 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHD6Q8TD26 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.05■□□□□ 0.8
CHD6Q8TD26 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.05■□□□□ 0.8
CHD6Q8TD26 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.05■□□□□ 0.8
CHD6Q8TD26 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD6Q8TD26 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHD6Q8TD26 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHD6Q8TD26 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD6Q8TD26 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD6Q8TD26 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.04■□□□□ 0.8
CHD6Q8TD26 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.04■□□□□ 0.8
CHD6Q8TD26 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHD6Q8TD26 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.04■□□□□ 0.8
CHD6Q8TD26 AP004609.3-201ENST00000610705 1884 ntBASIC20.04■□□□□ 0.8
CHD6Q8TD26 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHD6Q8TD26 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD6Q8TD26 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.04■□□□□ 0.8
CHD6Q8TD26 AC093787.1-201ENST00000450396 207 ntBASIC20.04■□□□□ 0.8
CHD6Q8TD26 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHD6Q8TD26 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.04■□□□□ 0.8
CHD6Q8TD26 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHD6Q8TD26 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD6Q8TD26 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHD6Q8TD26 AC007322.4-201ENST00000509611 723 ntBASIC20.04■□□□□ 0.8
CHD6Q8TD26 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.04■□□□□ 0.8
CHD6Q8TD26 AC008403.3-201ENST00000598924 454 ntBASIC20.04■□□□□ 0.8
CHD6Q8TD26 KRT17P2-201ENST00000300992 1314 ntBASIC20.03■□□□□ 0.8
CHD6Q8TD26 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.03■□□□□ 0.8
CHD6Q8TD26 AC016405.3-201ENST00000607710 860 ntBASIC20.03■□□□□ 0.8
CHD6Q8TD26 AC008694.1-202ENST00000636953 945 ntBASIC20.03■□□□□ 0.8
CHD6Q8TD26 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD6Q8TD26 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD6Q8TD26 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHD6Q8TD26 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHD6Q8TD26 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.03■□□□□ 0.8
CHD6Q8TD26 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.03■□□□□ 0.8
CHD6Q8TD26 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHD6Q8TD26 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHD6Q8TD26 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.02■□□□□ 0.8
CHD6Q8TD26 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.02■□□□□ 0.8
CHD6Q8TD26 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.02■□□□□ 0.8
CHD6Q8TD26 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.02■□□□□ 0.8
CHD6Q8TD26 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.02■□□□□ 0.8
CHD6Q8TD26 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.02■□□□□ 0.8
CHD6Q8TD26 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
CHD6Q8TD26 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CHD6Q8TD26 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.02■□□□□ 0.79
CHD6Q8TD26 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHD6Q8TD26 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.02■□□□□ 0.79
CHD6Q8TD26 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.02■□□□□ 0.79
CHD6Q8TD26 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.01■□□□□ 0.79
CHD6Q8TD26 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.01■□□□□ 0.79
CHD6Q8TD26 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CHD6Q8TD26 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.01■□□□□ 0.79
CHD6Q8TD26 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHD6Q8TD26 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHD6Q8TD26 KRT126P-201ENST00000549467 1181 ntBASIC20.01■□□□□ 0.79
CHD6Q8TD26 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.01■□□□□ 0.79
CHD6Q8TD26 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHD6Q8TD26 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20■□□□□ 0.79
CHD6Q8TD26 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20■□□□□ 0.79
CHD6Q8TD26 TSPY15P-201ENST00000457163 923 ntBASIC20■□□□□ 0.79
CHD6Q8TD26 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20■□□□□ 0.79
CHD6Q8TD26 AC233702.5-201ENST00000584107 538 ntBASIC20■□□□□ 0.79
CHD6Q8TD26 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CHD6Q8TD26 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CHD6Q8TD26 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CHD6Q8TD26 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms