Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 RNF126P1-201ENST00000567452 1320 ntBASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.85■□□□□ 0.77
CNIH3Q8TBE1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNIH3Q8TBE1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CNIH3Q8TBE1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNIH3Q8TBE1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNIH3Q8TBE1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CNIH3Q8TBE1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNIH3Q8TBE1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.83■□□□□ 0.77
CNIH3Q8TBE1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CNIH3Q8TBE1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNIH3Q8TBE1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CNIH3Q8TBE1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNIH3Q8TBE1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
CNIH3Q8TBE1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNIH3Q8TBE1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CNIH3Q8TBE1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CNIH3Q8TBE1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CNIH3Q8TBE1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CNIH3Q8TBE1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNIH3Q8TBE1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.82■□□□□ 0.76
CNIH3Q8TBE1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.82■□□□□ 0.76
CNIH3Q8TBE1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
CNIH3Q8TBE1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNIH3Q8TBE1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNIH3Q8TBE1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.82■□□□□ 0.76
CNIH3Q8TBE1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNIH3Q8TBE1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNIH3Q8TBE1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNIH3Q8TBE1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNIH3Q8TBE1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNIH3Q8TBE1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNIH3Q8TBE1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.8■□□□□ 0.76
CNIH3Q8TBE1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNIH3Q8TBE1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.8■□□□□ 0.76
CNIH3Q8TBE1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNIH3Q8TBE1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.8■□□□□ 0.76
CNIH3Q8TBE1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.8■□□□□ 0.76
CNIH3Q8TBE1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNIH3Q8TBE1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 LINC01529-204ENST00000636474 1715 ntBASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 AC022616.5-201ENST00000518796 181 ntBASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 AC120024.1-201ENST00000562672 995 ntBASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms