Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNIP1Q8TAD8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.59■□□□□ 0.89
SNIP1Q8TAD8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
SNIP1Q8TAD8 AC104187.1-201ENST00000607510 612 ntBASIC20.59■□□□□ 0.89
SNIP1Q8TAD8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNIP1Q8TAD8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 AC145676.1-201ENST00000514988 2004 ntBASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 AF201337.1-201ENST00000520239 748 ntBASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 UBE2DNL-204ENST00000602536 740 ntBASIC20.58■□□□□ 0.89
SNIP1Q8TAD8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNIP1Q8TAD8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.58■□□□□ 0.88
SNIP1Q8TAD8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.58■□□□□ 0.88
SNIP1Q8TAD8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.58■□□□□ 0.88
SNIP1Q8TAD8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SNIP1Q8TAD8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNIP1Q8TAD8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNIP1Q8TAD8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SNIP1Q8TAD8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNIP1Q8TAD8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNIP1Q8TAD8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SNIP1Q8TAD8 AC133552.2-202ENST00000575694 574 ntBASIC20.57■□□□□ 0.88
SNIP1Q8TAD8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SNIP1Q8TAD8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.57■□□□□ 0.88
SNIP1Q8TAD8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SNIP1Q8TAD8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.56■□□□□ 0.88
SNIP1Q8TAD8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNIP1Q8TAD8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SNIP1Q8TAD8 KRT18P29-201ENST00000397031 1267 ntBASIC20.56■□□□□ 0.88
SNIP1Q8TAD8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SNIP1Q8TAD8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNIP1Q8TAD8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNIP1Q8TAD8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNIP1Q8TAD8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
SNIP1Q8TAD8 MYCNOS-205ENST00000641950 531 ntBASIC20.56■□□□□ 0.88
SNIP1Q8TAD8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.56■□□□□ 0.88
SNIP1Q8TAD8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNIP1Q8TAD8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNIP1Q8TAD8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SNIP1Q8TAD8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 AC098934.4-201ENST00000564127 592 ntBASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 AC105036.2-201ENST00000569468 176 ntBASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 OXCT2P1-201ENST00000447263 1535 ntBASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNIP1Q8TAD8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNIP1Q8TAD8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNIP1Q8TAD8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms