Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.45■■□□□ 1.02
RFWD2Q8NHY2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.44■■□□□ 1.02
RFWD2Q8NHY2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFWD2Q8NHY2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD2Q8NHY2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RFWD2Q8NHY2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.42■■□□□ 1.02
RFWD2Q8NHY2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RFWD2Q8NHY2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.42■■□□□ 1.02
RFWD2Q8NHY2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD2Q8NHY2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD2Q8NHY2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RFWD2Q8NHY2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFWD2Q8NHY2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.42■■□□□ 1.02
RFWD2Q8NHY2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 MIR4281-201ENST00000580852 62 ntBASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 AC019171.1-201ENST00000601251 1056 ntBASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 Z98882.1-201ENST00000622160 2253 ntBASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFWD2Q8NHY2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.4■■□□□ 1.02
RFWD2Q8NHY2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFWD2Q8NHY2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RFWD2Q8NHY2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
RFWD2Q8NHY2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RFWD2Q8NHY2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.39■■□□□ 1.02
RFWD2Q8NHY2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFWD2Q8NHY2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RFWD2Q8NHY2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.39■■□□□ 1.01
RFWD2Q8NHY2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFWD2Q8NHY2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFWD2Q8NHY2 FEM1AP4-201ENST00000443167 1987 ntBASIC21.39■■□□□ 1.01
RFWD2Q8NHY2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFWD2Q8NHY2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms