Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTL9Q8NET4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTL9Q8NET4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTL9Q8NET4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RTL9Q8NET4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTL9Q8NET4 CDCA4P2-201ENST00000441182 718 ntBASIC26.97■■□□□ 1.91
RTL9Q8NET4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.97■■□□□ 1.91
RTL9Q8NET4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.97■■□□□ 1.91
RTL9Q8NET4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RTL9Q8NET4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
RTL9Q8NET4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
RTL9Q8NET4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.96■■□□□ 1.91
RTL9Q8NET4 GAS2L1P2-201ENST00000436355 1356 ntBASIC26.96■■□□□ 1.91
RTL9Q8NET4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC26.96■■□□□ 1.91
RTL9Q8NET4 AC137761.2-201ENST00000561729 223 ntBASIC26.96■■□□□ 1.91
RTL9Q8NET4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC26.96■■□□□ 1.91
RTL9Q8NET4 AC145350.3-201ENST00000569033 163 ntBASIC26.96■■□□□ 1.91
RTL9Q8NET4 AC073111.5-205ENST00000641717 521 ntBASIC26.96■■□□□ 1.91
RTL9Q8NET4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RTL9Q8NET4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.95■■□□□ 1.9
RTL9Q8NET4 KRT19P1-201ENST00000405746 1186 ntBASIC26.95■■□□□ 1.9
RTL9Q8NET4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
RTL9Q8NET4 AC079140.4-201ENST00000507448 529 ntBASIC26.95■■□□□ 1.9
RTL9Q8NET4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RTL9Q8NET4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
RTL9Q8NET4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTL9Q8NET4 LINC01960-201ENST00000563759 1884 ntBASIC26.94■■□□□ 1.9
RTL9Q8NET4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.94■■□□□ 1.9
RTL9Q8NET4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTL9Q8NET4 AC009237.3-201ENST00000393279 1427 ntBASIC26.94■■□□□ 1.9
RTL9Q8NET4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTL9Q8NET4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.94■■□□□ 1.9
RTL9Q8NET4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC26.94■■□□□ 1.9
RTL9Q8NET4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC26.94■■□□□ 1.9
RTL9Q8NET4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RTL9Q8NET4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTL9Q8NET4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.93■■□□□ 1.9
RTL9Q8NET4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTL9Q8NET4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
RTL9Q8NET4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RTL9Q8NET4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC26.93■■□□□ 1.9
RTL9Q8NET4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RTL9Q8NET4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.93■■□□□ 1.9
RTL9Q8NET4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC26.93■■□□□ 1.9
RTL9Q8NET4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RTL9Q8NET4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTL9Q8NET4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.93■■□□□ 1.9
RTL9Q8NET4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTL9Q8NET4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RTL9Q8NET4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.92■■□□□ 1.9
RTL9Q8NET4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
RTL9Q8NET4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RTL9Q8NET4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
RTL9Q8NET4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.92■■□□□ 1.9
RTL9Q8NET4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.92■■□□□ 1.9
RTL9Q8NET4 GXYLT1P5-201ENST00000614548 1189 ntBASIC26.92■■□□□ 1.9
RTL9Q8NET4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
RTL9Q8NET4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RTL9Q8NET4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RTL9Q8NET4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTL9Q8NET4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTL9Q8NET4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.91■■□□□ 1.9
RTL9Q8NET4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.91■■□□□ 1.9
RTL9Q8NET4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTL9Q8NET4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC26.91■■□□□ 1.9
RTL9Q8NET4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC26.91■■□□□ 1.9
RTL9Q8NET4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTL9Q8NET4 AC079089.2-201ENST00000531211 1277 ntBASIC26.91■■□□□ 1.9
RTL9Q8NET4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RTL9Q8NET4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RTL9Q8NET4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTL9Q8NET4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RTL9Q8NET4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTL9Q8NET4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTL9Q8NET4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTL9Q8NET4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTL9Q8NET4 AC016769.1-201ENST00000409132 1010 ntBASIC26.9■■□□□ 1.9
RTL9Q8NET4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC26.9■■□□□ 1.9
RTL9Q8NET4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.9■■□□□ 1.9
RTL9Q8NET4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTL9Q8NET4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.9■■□□□ 1.9
RTL9Q8NET4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTL9Q8NET4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
RTL9Q8NET4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
RTL9Q8NET4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RTL9Q8NET4 KRT87P-202ENST00000534226 1464 ntBASIC26.88■■□□□ 1.89
RTL9Q8NET4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RTL9Q8NET4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RTL9Q8NET4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC26.88■■□□□ 1.89
RTL9Q8NET4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.88■■□□□ 1.89
RTL9Q8NET4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
RTL9Q8NET4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
RTL9Q8NET4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.88■■□□□ 1.89
RTL9Q8NET4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RTL9Q8NET4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RTL9Q8NET4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RTL9Q8NET4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RTL9Q8NET4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
RTL9Q8NET4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RTL9Q8NET4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms