Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 SMUG1P1-201ENST00000590640 811 ntBASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.55■■□□□ 1.04
TRAM1L1Q8N609 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAM1L1Q8N609 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAM1L1Q8N609 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 LINC00526-201ENST00000581067 1875 ntBASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRAM1L1Q8N609 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRAM1L1Q8N609 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.52■■□□□ 1.03
TRAM1L1Q8N609 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
TRAM1L1Q8N609 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TRAM1L1Q8N609 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRAM1L1Q8N609 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 AC139530.1-201ENST00000575312 1977 ntBASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 OR7E47P-201ENST00000546390 1422 ntBASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.51■■□□□ 1.03
TRAM1L1Q8N609 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAM1L1Q8N609 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAM1L1Q8N609 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAM1L1Q8N609 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TRAM1L1Q8N609 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.5■■□□□ 1.03
TRAM1L1Q8N609 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAM1L1Q8N609 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRAM1L1Q8N609 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.5■■□□□ 1.03
TRAM1L1Q8N609 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.5■■□□□ 1.03
TRAM1L1Q8N609 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.5■■□□□ 1.03
TRAM1L1Q8N609 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAM1L1Q8N609 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAM1L1Q8N609 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAM1L1Q8N609 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAM1L1Q8N609 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.49■■□□□ 1.03
TRAM1L1Q8N609 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAM1L1Q8N609 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAM1L1Q8N609 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAM1L1Q8N609 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAM1L1Q8N609 AC027612.3-201ENST00000413684 1047 ntBASIC21.49■■□□□ 1.03
TRAM1L1Q8N609 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms