Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL27A1Q8IZC6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.79■□□□□ 0.92
COL27A1Q8IZC6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL27A1Q8IZC6 GPX1P1-201ENST00000388829 606 ntBASIC20.79■□□□□ 0.92
COL27A1Q8IZC6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL27A1Q8IZC6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL27A1Q8IZC6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL27A1Q8IZC6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.79■□□□□ 0.92
COL27A1Q8IZC6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
COL27A1Q8IZC6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.79■□□□□ 0.92
COL27A1Q8IZC6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.79■□□□□ 0.92
COL27A1Q8IZC6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 MIR4651-201ENST00000582622 73 ntBASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 AC231657.2-201ENST00000624556 255 ntBASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL27A1Q8IZC6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
COL27A1Q8IZC6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL27A1Q8IZC6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL27A1Q8IZC6 OXCT2P1-201ENST00000447263 1535 ntBASIC20.77■□□□□ 0.92
COL27A1Q8IZC6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.77■□□□□ 0.92
COL27A1Q8IZC6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
COL27A1Q8IZC6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL27A1Q8IZC6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
COL27A1Q8IZC6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.77■□□□□ 0.92
COL27A1Q8IZC6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.77■□□□□ 0.92
COL27A1Q8IZC6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
COL27A1Q8IZC6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL27A1Q8IZC6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.77■□□□□ 0.91
COL27A1Q8IZC6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
COL27A1Q8IZC6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL27A1Q8IZC6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL27A1Q8IZC6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL27A1Q8IZC6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
COL27A1Q8IZC6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.76■□□□□ 0.91
COL27A1Q8IZC6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.76■□□□□ 0.91
COL27A1Q8IZC6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL27A1Q8IZC6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.76■□□□□ 0.91
COL27A1Q8IZC6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.76■□□□□ 0.91
COL27A1Q8IZC6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL27A1Q8IZC6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
COL27A1Q8IZC6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 TSPY6P-201ENST00000448518 926 ntBASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 KRT18P6-201ENST00000555540 1265 ntBASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 DUSP8P5-201ENST00000422884 1815 ntBASIC20.75■□□□□ 0.91
COL27A1Q8IZC6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 AC009237.3-201ENST00000393279 1427 ntBASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 AL138781.1-201ENST00000566567 1274 ntBASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 AL121832.2-201ENST00000610979 668 ntBASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL27A1Q8IZC6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 AC069152.1-201ENST00000438030 544 ntBASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.73■□□□□ 0.91
COL27A1Q8IZC6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms