Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
APLFQ8IW19 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
APLFQ8IW19 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
APLFQ8IW19 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
APLFQ8IW19 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.39■■□□□ 1.01
APLFQ8IW19 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
APLFQ8IW19 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.39■■□□□ 1.01
APLFQ8IW19 AF213884.3-201ENST00000563833 479 ntBASIC21.39■■□□□ 1.01
APLFQ8IW19 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.39■■□□□ 1.01
APLFQ8IW19 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
APLFQ8IW19 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
APLFQ8IW19 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.39■■□□□ 1.01
APLFQ8IW19 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
APLFQ8IW19 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
APLFQ8IW19 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
APLFQ8IW19 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
APLFQ8IW19 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
APLFQ8IW19 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
APLFQ8IW19 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.38■■□□□ 1.01
APLFQ8IW19 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
APLFQ8IW19 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
APLFQ8IW19 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
APLFQ8IW19 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.38■■□□□ 1.01
APLFQ8IW19 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.38■■□□□ 1.01
APLFQ8IW19 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
APLFQ8IW19 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.38■■□□□ 1.01
APLFQ8IW19 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
APLFQ8IW19 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
APLFQ8IW19 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.37■■□□□ 1.01
APLFQ8IW19 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
APLFQ8IW19 AP001330.3-201ENST00000520123 633 ntBASIC21.37■■□□□ 1.01
APLFQ8IW19 AC104564.3-201ENST00000582367 638 ntBASIC21.37■■□□□ 1.01
APLFQ8IW19 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.37■■□□□ 1.01
APLFQ8IW19 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
APLFQ8IW19 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
APLFQ8IW19 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
APLFQ8IW19 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.37■■□□□ 1.01
APLFQ8IW19 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
APLFQ8IW19 SYT6-210ENST00000641643 1587 ntBASIC21.36■■□□□ 1.01
APLFQ8IW19 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
APLFQ8IW19 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
APLFQ8IW19 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
APLFQ8IW19 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.36■■□□□ 1.01
APLFQ8IW19 AC091305.1-201ENST00000479476 895 ntBASIC21.36■■□□□ 1.01
APLFQ8IW19 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
APLFQ8IW19 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
APLFQ8IW19 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
APLFQ8IW19 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
APLFQ8IW19 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
APLFQ8IW19 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.36■■□□□ 1.01
APLFQ8IW19 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
APLFQ8IW19 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
APLFQ8IW19 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.36■■□□□ 1.01
APLFQ8IW19 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.36■■□□□ 1.01
APLFQ8IW19 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
APLFQ8IW19 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
APLFQ8IW19 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
APLFQ8IW19 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
APLFQ8IW19 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.35■■□□□ 1.01
APLFQ8IW19 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
APLFQ8IW19 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
APLFQ8IW19 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
APLFQ8IW19 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
APLFQ8IW19 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
APLFQ8IW19 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
APLFQ8IW19 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
APLFQ8IW19 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
APLFQ8IW19 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
APLFQ8IW19 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.34■■□□□ 1.01
APLFQ8IW19 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.34■■□□□ 1.01
APLFQ8IW19 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.34■■□□□ 1.01
APLFQ8IW19 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APLFQ8IW19 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APLFQ8IW19 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
APLFQ8IW19 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
APLFQ8IW19 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.34■■□□□ 1.01
APLFQ8IW19 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
APLFQ8IW19 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.34■■□□□ 1.01
APLFQ8IW19 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
APLFQ8IW19 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
APLFQ8IW19 HLA-L-211ENST00000482052 1765 ntBASIC21.33■■□□□ 1.01
APLFQ8IW19 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.33■■□□□ 1.01
APLFQ8IW19 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.33■■□□□ 1.01
APLFQ8IW19 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
APLFQ8IW19 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
APLFQ8IW19 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
APLFQ8IW19 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
APLFQ8IW19 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.33■■□□□ 1.01
APLFQ8IW19 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.33■■□□□ 1.01
APLFQ8IW19 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.33■■□□□ 1.01
APLFQ8IW19 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.33■■□□□ 1
APLFQ8IW19 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
APLFQ8IW19 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
APLFQ8IW19 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.32■■□□□ 1
APLFQ8IW19 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
APLFQ8IW19 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APLFQ8IW19 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APLFQ8IW19 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.32■■□□□ 1
APLFQ8IW19 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
APLFQ8IW19 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms