Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUDCD3Q8IVD9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUDCD3Q8IVD9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.55■■□□□ 1.04
NUDCD3Q8IVD9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.55■■□□□ 1.04
NUDCD3Q8IVD9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUDCD3Q8IVD9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NUDCD3Q8IVD9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUDCD3Q8IVD9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUDCD3Q8IVD9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUDCD3Q8IVD9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.55■■□□□ 1.04
NUDCD3Q8IVD9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUDCD3Q8IVD9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.55■■□□□ 1.04
NUDCD3Q8IVD9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.55■■□□□ 1.04
NUDCD3Q8IVD9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 TSPY13P-201ENST00000338964 914 ntBASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NUDCD3Q8IVD9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 CA15P2-201ENST00000611168 834 ntBASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 MIR6722-201ENST00000617286 78 ntBASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 AC004687.1-201ENST00000579003 1625 ntBASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 SLC25A24-204ENST00000569674 2357 ntBASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NUDCD3Q8IVD9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
NUDCD3Q8IVD9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUDCD3Q8IVD9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NUDCD3Q8IVD9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NUDCD3Q8IVD9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
NUDCD3Q8IVD9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUDCD3Q8IVD9 AC137630.3-201ENST00000607245 391 ntBASIC21.52■■□□□ 1.04
NUDCD3Q8IVD9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUDCD3Q8IVD9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NUDCD3Q8IVD9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NUDCD3Q8IVD9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NUDCD3Q8IVD9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
NUDCD3Q8IVD9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
NUDCD3Q8IVD9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
NUDCD3Q8IVD9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NUDCD3Q8IVD9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUDCD3Q8IVD9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUDCD3Q8IVD9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUDCD3Q8IVD9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUDCD3Q8IVD9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NUDCD3Q8IVD9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
NUDCD3Q8IVD9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUDCD3Q8IVD9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.5■■□□□ 1.03
NUDCD3Q8IVD9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.5■■□□□ 1.03
NUDCD3Q8IVD9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUDCD3Q8IVD9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NUDCD3Q8IVD9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NUDCD3Q8IVD9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.49■■□□□ 1.03
NUDCD3Q8IVD9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUDCD3Q8IVD9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUDCD3Q8IVD9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms