Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC71Q8IV32 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC71Q8IV32 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC71Q8IV32 AC105265.2-201ENST00000467189 838 ntBASIC20.35■□□□□ 0.85
CCDC71Q8IV32 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC71Q8IV32 DUX4L19-201ENST00000557448 1267 ntBASIC20.35■□□□□ 0.85
CCDC71Q8IV32 AL136967.2-201ENST00000623968 743 ntBASIC20.35■□□□□ 0.85
CCDC71Q8IV32 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC71Q8IV32 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC71Q8IV32 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC71Q8IV32 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC71Q8IV32 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 SYT6-210ENST00000641643 1587 ntBASIC20.34■□□□□ 0.85
CCDC71Q8IV32 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC71Q8IV32 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC71Q8IV32 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CCDC71Q8IV32 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC71Q8IV32 AC026271.2-201ENST00000428091 497 ntBASIC20.33■□□□□ 0.85
CCDC71Q8IV32 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC71Q8IV32 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC71Q8IV32 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
CCDC71Q8IV32 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.33■□□□□ 0.85
CCDC71Q8IV32 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC71Q8IV32 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC71Q8IV32 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CCDC71Q8IV32 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC71Q8IV32 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CCDC71Q8IV32 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC71Q8IV32 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 AC092666.2-201ENST00000613287 246 ntBASIC20.32■□□□□ 0.84
CCDC71Q8IV32 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 AC026310.3-201ENST00000625186 2373 ntBASIC20.32■□□□□ 0.84
CCDC71Q8IV32 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC71Q8IV32 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC71Q8IV32 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC71Q8IV32 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC71Q8IV32 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC71Q8IV32 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC71Q8IV32 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC71Q8IV32 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC71Q8IV32 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC71Q8IV32 AP001330.3-201ENST00000520123 633 ntBASIC20.31■□□□□ 0.84
CCDC71Q8IV32 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC71Q8IV32 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC71Q8IV32 AL353803.4-201ENST00000565882 1934 ntBASIC20.31■□□□□ 0.84
CCDC71Q8IV32 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC71Q8IV32 AC087742.1-201ENST00000575880 1738 ntBASIC20.3■□□□□ 0.84
CCDC71Q8IV32 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC71Q8IV32 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC71Q8IV32 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCDC71Q8IV32 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC71Q8IV32 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC71Q8IV32 MIR939-201ENST00000401314 82 ntBASIC20.3■□□□□ 0.84
CCDC71Q8IV32 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC71Q8IV32 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC71Q8IV32 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC71Q8IV32 MIR4767-201ENST00000582827 78 ntBASIC20.3■□□□□ 0.84
CCDC71Q8IV32 AC099791.2-201ENST00000605725 427 ntBASIC20.3■□□□□ 0.84
CCDC71Q8IV32 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC71Q8IV32 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC71Q8IV32 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 SERBP1P1-201ENST00000396021 1160 ntBASIC20.29■□□□□ 0.84
CCDC71Q8IV32 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 AC092171.4-201ENST00000609130 632 ntBASIC20.29■□□□□ 0.84
CCDC71Q8IV32 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC71Q8IV32 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms