Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.67■■□□□ 1.86
USP48Q86UV5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
USP48Q86UV5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.67■■□□□ 1.86
USP48Q86UV5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
USP48Q86UV5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
USP48Q86UV5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
USP48Q86UV5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
USP48Q86UV5 CROCCP5-201ENST00000436658 830 ntBASIC26.67■■□□□ 1.86
USP48Q86UV5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
USP48Q86UV5 AC006970.2-201ENST00000450065 779 ntBASIC26.67■■□□□ 1.86
USP48Q86UV5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.67■■□□□ 1.86
USP48Q86UV5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
USP48Q86UV5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
USP48Q86UV5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
USP48Q86UV5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
USP48Q86UV5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
USP48Q86UV5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
USP48Q86UV5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
USP48Q86UV5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
USP48Q86UV5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.66■■□□□ 1.86
USP48Q86UV5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
USP48Q86UV5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
USP48Q86UV5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
USP48Q86UV5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
USP48Q86UV5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.65■■□□□ 1.86
USP48Q86UV5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
USP48Q86UV5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
USP48Q86UV5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.65■■□□□ 1.86
USP48Q86UV5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.65■■□□□ 1.86
USP48Q86UV5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC26.65■■□□□ 1.86
USP48Q86UV5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.65■■□□□ 1.86
USP48Q86UV5 BID-214ENST00000617586 542 ntTSL 5 BASIC26.65■■□□□ 1.86
USP48Q86UV5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
USP48Q86UV5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.65■■□□□ 1.86
USP48Q86UV5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
USP48Q86UV5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
USP48Q86UV5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
USP48Q86UV5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.65■■□□□ 1.86
USP48Q86UV5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
USP48Q86UV5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
USP48Q86UV5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
USP48Q86UV5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
USP48Q86UV5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.64■■□□□ 1.86
USP48Q86UV5 AP004607.4-201ENST00000530158 1459 ntBASIC26.64■■□□□ 1.86
USP48Q86UV5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
USP48Q86UV5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.85
USP48Q86UV5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.64■■□□□ 1.85
USP48Q86UV5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
USP48Q86UV5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.64■■□□□ 1.85
USP48Q86UV5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
USP48Q86UV5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
USP48Q86UV5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
USP48Q86UV5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.63■■□□□ 1.85
USP48Q86UV5 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.63■■□□□ 1.85
USP48Q86UV5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
USP48Q86UV5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.63■■□□□ 1.85
USP48Q86UV5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
USP48Q86UV5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
USP48Q86UV5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
USP48Q86UV5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
USP48Q86UV5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
USP48Q86UV5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
USP48Q86UV5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC26.62■■□□□ 1.85
USP48Q86UV5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
USP48Q86UV5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC26.62■■□□□ 1.85
USP48Q86UV5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
USP48Q86UV5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
USP48Q86UV5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
USP48Q86UV5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
USP48Q86UV5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
USP48Q86UV5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.62■■□□□ 1.85
USP48Q86UV5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.61■■□□□ 1.85
USP48Q86UV5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
USP48Q86UV5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
USP48Q86UV5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.61■■□□□ 1.85
USP48Q86UV5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
USP48Q86UV5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.61■■□□□ 1.85
USP48Q86UV5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
USP48Q86UV5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
USP48Q86UV5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.61■■□□□ 1.85
USP48Q86UV5 AC004854.2-201ENST00000608450 1441 ntBASIC26.61■■□□□ 1.85
USP48Q86UV5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
USP48Q86UV5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.61■■□□□ 1.85
USP48Q86UV5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
USP48Q86UV5 NCF1B-203ENST00000435988 1254 ntBASIC26.6■■□□□ 1.85
USP48Q86UV5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
USP48Q86UV5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
USP48Q86UV5 AC066615.1-201ENST00000640911 628 ntBASIC26.6■■□□□ 1.85
USP48Q86UV5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
USP48Q86UV5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
USP48Q86UV5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
USP48Q86UV5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
USP48Q86UV5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.6■■□□□ 1.85
USP48Q86UV5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
USP48Q86UV5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
USP48Q86UV5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
USP48Q86UV5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.59■■□□□ 1.85
USP48Q86UV5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.59■■□□□ 1.85
USP48Q86UV5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
USP48Q86UV5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms