Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.78■□□□□ 0.76
ATG4DQ86TL0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATG4DQ86TL0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATG4DQ86TL0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATG4DQ86TL0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.77■□□□□ 0.76
ATG4DQ86TL0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
ATG4DQ86TL0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATG4DQ86TL0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.77■□□□□ 0.76
ATG4DQ86TL0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATG4DQ86TL0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATG4DQ86TL0 C11orf96-202ENST00000528572 1834 ntBASIC19.77■□□□□ 0.76
ATG4DQ86TL0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATG4DQ86TL0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.77■□□□□ 0.76
ATG4DQ86TL0 AC010525.1-201ENST00000585559 441 ntBASIC19.77■□□□□ 0.76
ATG4DQ86TL0 AC068587.7-201ENST00000641602 218 ntBASIC19.77■□□□□ 0.76
ATG4DQ86TL0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATG4DQ86TL0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.77■□□□□ 0.75
ATG4DQ86TL0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.76■□□□□ 0.75
ATG4DQ86TL0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.76■□□□□ 0.75
ATG4DQ86TL0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.76■□□□□ 0.75
ATG4DQ86TL0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATG4DQ86TL0 MIR935-201ENST00000401179 91 ntBASIC19.76■□□□□ 0.75
ATG4DQ86TL0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.76■□□□□ 0.75
ATG4DQ86TL0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.76■□□□□ 0.75
ATG4DQ86TL0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATG4DQ86TL0 AL136162.1-201ENST00000607711 1078 ntBASIC19.76■□□□□ 0.75
ATG4DQ86TL0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATG4DQ86TL0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATG4DQ86TL0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATG4DQ86TL0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.76■□□□□ 0.75
ATG4DQ86TL0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 AC106739.1-201ENST00000617035 715 ntBASIC19.75■□□□□ 0.75
ATG4DQ86TL0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATG4DQ86TL0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATG4DQ86TL0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATG4DQ86TL0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATG4DQ86TL0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATG4DQ86TL0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATG4DQ86TL0 AC024257.2-201ENST00000549699 147 ntBASIC19.74■□□□□ 0.75
ATG4DQ86TL0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATG4DQ86TL0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.74■□□□□ 0.75
ATG4DQ86TL0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATG4DQ86TL0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATG4DQ86TL0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATG4DQ86TL0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 AC079089.2-201ENST00000531211 1277 ntBASIC19.73■□□□□ 0.75
ATG4DQ86TL0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ATG4DQ86TL0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.72■□□□□ 0.75
ATG4DQ86TL0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms