Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDHR3Q6ZTQ4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDHR3Q6ZTQ4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDHR3Q6ZTQ4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDHR3Q6ZTQ4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDHR3Q6ZTQ4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CDHR3Q6ZTQ4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.84■■□□□ 1.09
CDHR3Q6ZTQ4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.84■■□□□ 1.09
CDHR3Q6ZTQ4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.84■■□□□ 1.09
CDHR3Q6ZTQ4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDHR3Q6ZTQ4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDHR3Q6ZTQ4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDHR3Q6ZTQ4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.83■■□□□ 1.09
CDHR3Q6ZTQ4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDHR3Q6ZTQ4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDHR3Q6ZTQ4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.83■■□□□ 1.09
CDHR3Q6ZTQ4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDHR3Q6ZTQ4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDHR3Q6ZTQ4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDHR3Q6ZTQ4 LINC01960-201ENST00000563759 1884 ntBASIC21.83■■□□□ 1.08
CDHR3Q6ZTQ4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.83■■□□□ 1.08
CDHR3Q6ZTQ4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDHR3Q6ZTQ4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDHR3Q6ZTQ4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDHR3Q6ZTQ4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.81■■□□□ 1.08
CDHR3Q6ZTQ4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDHR3Q6ZTQ4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDHR3Q6ZTQ4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.8■■□□□ 1.08
CDHR3Q6ZTQ4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CDHR3Q6ZTQ4 FP325331.1-202ENST00000623531 1380 ntBASIC21.8■■□□□ 1.08
CDHR3Q6ZTQ4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.8■■□□□ 1.08
CDHR3Q6ZTQ4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.8■■□□□ 1.08
CDHR3Q6ZTQ4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.8■■□□□ 1.08
CDHR3Q6ZTQ4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDHR3Q6ZTQ4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDHR3Q6ZTQ4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.79■■□□□ 1.08
CDHR3Q6ZTQ4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.79■■□□□ 1.08
CDHR3Q6ZTQ4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDHR3Q6ZTQ4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.79■■□□□ 1.08
CDHR3Q6ZTQ4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDHR3Q6ZTQ4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDHR3Q6ZTQ4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDHR3Q6ZTQ4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.79■■□□□ 1.08
CDHR3Q6ZTQ4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDHR3Q6ZTQ4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CDHR3Q6ZTQ4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.78■■□□□ 1.08
CDHR3Q6ZTQ4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.78■■□□□ 1.08
CDHR3Q6ZTQ4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDHR3Q6ZTQ4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.78■■□□□ 1.08
CDHR3Q6ZTQ4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDHR3Q6ZTQ4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.78■■□□□ 1.08
CDHR3Q6ZTQ4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CDHR3Q6ZTQ4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.78■■□□□ 1.08
CDHR3Q6ZTQ4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDHR3Q6ZTQ4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDHR3Q6ZTQ4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDHR3Q6ZTQ4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDHR3Q6ZTQ4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDHR3Q6ZTQ4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDHR3Q6ZTQ4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDHR3Q6ZTQ4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.77■■□□□ 1.08
CDHR3Q6ZTQ4 SRD5A1P1-201ENST00000442297 786 ntBASIC21.77■■□□□ 1.08
CDHR3Q6ZTQ4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CDHR3Q6ZTQ4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDHR3Q6ZTQ4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.76■■□□□ 1.07
CDHR3Q6ZTQ4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.76■■□□□ 1.07
CDHR3Q6ZTQ4 AC096631.2-201ENST00000436136 790 ntBASIC21.76■■□□□ 1.07
CDHR3Q6ZTQ4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDHR3Q6ZTQ4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.76■■□□□ 1.07
CDHR3Q6ZTQ4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms