Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.8■□□□□ 0.6
COLCA1Q6ZS62 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.8■□□□□ 0.6
COLCA1Q6ZS62 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.8■□□□□ 0.6
COLCA1Q6ZS62 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.8■□□□□ 0.6
COLCA1Q6ZS62 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COLCA1Q6ZS62 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COLCA1Q6ZS62 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
COLCA1Q6ZS62 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COLCA1Q6ZS62 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COLCA1Q6ZS62 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COLCA1Q6ZS62 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.79■□□□□ 0.6
COLCA1Q6ZS62 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COLCA1Q6ZS62 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COLCA1Q6ZS62 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
COLCA1Q6ZS62 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.79■□□□□ 0.6
COLCA1Q6ZS62 AC106739.1-201ENST00000617035 715 ntBASIC18.79■□□□□ 0.6
COLCA1Q6ZS62 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.79■□□□□ 0.6
COLCA1Q6ZS62 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COLCA1Q6ZS62 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.78■□□□□ 0.6
COLCA1Q6ZS62 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COLCA1Q6ZS62 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.78■□□□□ 0.6
COLCA1Q6ZS62 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COLCA1Q6ZS62 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COLCA1Q6ZS62 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
COLCA1Q6ZS62 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COLCA1Q6ZS62 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.78■□□□□ 0.6
COLCA1Q6ZS62 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COLCA1Q6ZS62 AC110285.6-201ENST00000617652 491 ntBASIC18.78■□□□□ 0.6
COLCA1Q6ZS62 OXCT2P1-201ENST00000447263 1535 ntBASIC18.78■□□□□ 0.6
COLCA1Q6ZS62 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COLCA1Q6ZS62 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.77■□□□□ 0.6
COLCA1Q6ZS62 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COLCA1Q6ZS62 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COLCA1Q6ZS62 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COLCA1Q6ZS62 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COLCA1Q6ZS62 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COLCA1Q6ZS62 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
COLCA1Q6ZS62 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COLCA1Q6ZS62 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COLCA1Q6ZS62 PBX2P1-201ENST00000493219 1291 ntBASIC18.77■□□□□ 0.6
COLCA1Q6ZS62 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COLCA1Q6ZS62 AC233992.3-201ENST00000607491 485 ntBASIC18.77■□□□□ 0.6
COLCA1Q6ZS62 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COLCA1Q6ZS62 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.77■□□□□ 0.59
COLCA1Q6ZS62 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
COLCA1Q6ZS62 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
COLCA1Q6ZS62 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
COLCA1Q6ZS62 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
COLCA1Q6ZS62 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COLCA1Q6ZS62 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
COLCA1Q6ZS62 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.76■□□□□ 0.59
COLCA1Q6ZS62 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.76■□□□□ 0.59
COLCA1Q6ZS62 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COLCA1Q6ZS62 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COLCA1Q6ZS62 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.76■□□□□ 0.59
COLCA1Q6ZS62 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.76■□□□□ 0.59
COLCA1Q6ZS62 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.76■□□□□ 0.59
COLCA1Q6ZS62 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COLCA1Q6ZS62 AC133561.4-201ENST00000566112 224 ntBASIC18.76■□□□□ 0.59
COLCA1Q6ZS62 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COLCA1Q6ZS62 C11orf96-202ENST00000528572 1834 ntBASIC18.76■□□□□ 0.59
COLCA1Q6ZS62 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COLCA1Q6ZS62 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COLCA1Q6ZS62 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 EDA-201ENST00000338901 1233 ntBASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COLCA1Q6ZS62 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COLCA1Q6ZS62 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms