Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NHLRC1Q6VVB1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
NHLRC1Q6VVB1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NHLRC1Q6VVB1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
NHLRC1Q6VVB1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NHLRC1Q6VVB1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NHLRC1Q6VVB1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NHLRC1Q6VVB1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NHLRC1Q6VVB1 UNC93B3-201ENST00000308076 687 ntBASIC19.5■□□□□ 0.71
NHLRC1Q6VVB1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
NHLRC1Q6VVB1 AC010525.1-201ENST00000585559 441 ntBASIC19.5■□□□□ 0.71
NHLRC1Q6VVB1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.5■□□□□ 0.71
NHLRC1Q6VVB1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
NHLRC1Q6VVB1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NHLRC1Q6VVB1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.5■□□□□ 0.71
NHLRC1Q6VVB1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NHLRC1Q6VVB1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NHLRC1Q6VVB1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 LINC00526-201ENST00000581067 1875 ntBASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NHLRC1Q6VVB1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 AC007375.3-201ENST00000600936 2314 ntBASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.48■□□□□ 0.71
NHLRC1Q6VVB1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NHLRC1Q6VVB1 AC008406.3-201ENST00000620001 1374 ntBASIC19.47■□□□□ 0.71
NHLRC1Q6VVB1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NHLRC1Q6VVB1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NHLRC1Q6VVB1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NHLRC1Q6VVB1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NHLRC1Q6VVB1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NHLRC1Q6VVB1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NHLRC1Q6VVB1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NHLRC1Q6VVB1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NHLRC1Q6VVB1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NHLRC1Q6VVB1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
NHLRC1Q6VVB1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NHLRC1Q6VVB1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NHLRC1Q6VVB1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms