Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LRFN4Q6PJG9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN4Q6PJG9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.49■□□□□ 0.71
LRFN4Q6PJG9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN4Q6PJG9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
LRFN4Q6PJG9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN4Q6PJG9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN4Q6PJG9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN4Q6PJG9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN4Q6PJG9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
LRFN4Q6PJG9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LRFN4Q6PJG9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN4Q6PJG9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN4Q6PJG9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.47■□□□□ 0.71
LRFN4Q6PJG9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN4Q6PJG9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.47■□□□□ 0.71
LRFN4Q6PJG9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN4Q6PJG9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.47■□□□□ 0.71
LRFN4Q6PJG9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN4Q6PJG9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRFN4Q6PJG9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN4Q6PJG9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.47■□□□□ 0.71
LRFN4Q6PJG9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 SERBP1P1-201ENST00000396021 1160 ntBASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 DUX4L19-201ENST00000557448 1267 ntBASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 AC242852.2-201ENST00000615738 1807 ntBASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN4Q6PJG9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 SYT6-210ENST00000641643 1587 ntBASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 LINC01960-201ENST00000563759 1884 ntBASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRFN4Q6PJG9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 AC127496.7-201ENST00000625110 1798 ntBASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRFN4Q6PJG9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN4Q6PJG9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN4Q6PJG9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.43■□□□□ 0.7
LRFN4Q6PJG9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN4Q6PJG9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN4Q6PJG9 AL138724.1-201ENST00000606771 1088 ntBASIC19.43■□□□□ 0.7
LRFN4Q6PJG9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN4Q6PJG9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN4Q6PJG9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN4Q6PJG9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.43■□□□□ 0.7
LRFN4Q6PJG9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN4Q6PJG9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRFN4Q6PJG9 AC008406.3-201ENST00000620001 1374 ntBASIC19.43■□□□□ 0.7
LRFN4Q6PJG9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRFN4Q6PJG9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms