Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 MIR4466-201ENST00000606121 54 ntBASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
FOXR1Q6PIV2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.56■■□□□ 1.2
FOXR1Q6PIV2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FOXR1Q6PIV2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
FOXR1Q6PIV2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FOXR1Q6PIV2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
FOXR1Q6PIV2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.56■■□□□ 1.2
FOXR1Q6PIV2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.56■■□□□ 1.2
FOXR1Q6PIV2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.56■■□□□ 1.2
FOXR1Q6PIV2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.55■■□□□ 1.2
FOXR1Q6PIV2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FOXR1Q6PIV2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
FOXR1Q6PIV2 AC005837.3-201ENST00000612163 286 ntBASIC22.55■■□□□ 1.2
FOXR1Q6PIV2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FOXR1Q6PIV2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.55■■□□□ 1.2
FOXR1Q6PIV2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FOXR1Q6PIV2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FOXR1Q6PIV2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FOXR1Q6PIV2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.55■■□□□ 1.2
FOXR1Q6PIV2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.55■■□□□ 1.2
FOXR1Q6PIV2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXR1Q6PIV2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXR1Q6PIV2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXR1Q6PIV2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXR1Q6PIV2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
FOXR1Q6PIV2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
FOXR1Q6PIV2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXR1Q6PIV2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FOXR1Q6PIV2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
FOXR1Q6PIV2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.54■■□□□ 1.2
FOXR1Q6PIV2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXR1Q6PIV2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.53■■□□□ 1.2
FOXR1Q6PIV2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.53■■□□□ 1.2
FOXR1Q6PIV2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
FOXR1Q6PIV2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.53■■□□□ 1.2
FOXR1Q6PIV2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
FOXR1Q6PIV2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FOXR1Q6PIV2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FOXR1Q6PIV2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FOXR1Q6PIV2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
FOXR1Q6PIV2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FOXR1Q6PIV2 FAM99A-202ENST00000538190 1989 ntBASIC22.52■■□□□ 1.2
FOXR1Q6PIV2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FOXR1Q6PIV2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FOXR1Q6PIV2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.52■■□□□ 1.2
FOXR1Q6PIV2 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.52■■□□□ 1.2
FOXR1Q6PIV2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.52■■□□□ 1.2
FOXR1Q6PIV2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
FOXR1Q6PIV2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FOXR1Q6PIV2 AC079630.1-202ENST00000618127 1840 ntBASIC22.52■■□□□ 1.2
FOXR1Q6PIV2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.51■■□□□ 1.19
FOXR1Q6PIV2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FOXR1Q6PIV2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
FOXR1Q6PIV2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
FOXR1Q6PIV2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
FOXR1Q6PIV2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.51■■□□□ 1.19
FOXR1Q6PIV2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
FOXR1Q6PIV2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
FOXR1Q6PIV2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FOXR1Q6PIV2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
FOXR1Q6PIV2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
FOXR1Q6PIV2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
FOXR1Q6PIV2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.49■■□□□ 1.19
FOXR1Q6PIV2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
FOXR1Q6PIV2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
FOXR1Q6PIV2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
FOXR1Q6PIV2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FOXR1Q6PIV2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FOXR1Q6PIV2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.48■■□□□ 1.19
FOXR1Q6PIV2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.48■■□□□ 1.19
FOXR1Q6PIV2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
FOXR1Q6PIV2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FOXR1Q6PIV2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
FOXR1Q6PIV2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FOXR1Q6PIV2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
FOXR1Q6PIV2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FOXR1Q6PIV2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
FOXR1Q6PIV2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.47■■□□□ 1.19
FOXR1Q6PIV2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FOXR1Q6PIV2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.47■■□□□ 1.19
FOXR1Q6PIV2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.47■■□□□ 1.19
FOXR1Q6PIV2 AF106564.1-201ENST00000607058 2553 ntBASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms