Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LINC00242Q5T6M2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 ATP5G2P3-201ENST00000429083 425 ntBASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 ABHD17AP5-201ENST00000580133 923 ntBASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00242Q5T6M2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 AC004987.1-201ENST00000428627 508 ntBASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LINC00242Q5T6M2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.83□□□□□ -0.03
LINC00242Q5T6M2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
LINC00242Q5T6M2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.83□□□□□ -0.03
LINC00242Q5T6M2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.83□□□□□ -0.03
LINC00242Q5T6M2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.83□□□□□ -0.03
LINC00242Q5T6M2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 MIR4508-201ENST00000584178 70 ntBASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 MIR6722-201ENST00000617286 78 ntBASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 AC004687.1-201ENST00000579003 1625 ntBASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC00242Q5T6M2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 Z98882.1-201ENST00000622160 2253 ntBASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00242Q5T6M2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms