Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.21■□□□□ 0.67
LRRK2Q5S007 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.21■□□□□ 0.67
LRRK2Q5S007 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRK2Q5S007 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
LRRK2Q5S007 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
LRRK2Q5S007 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRRK2Q5S007 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRK2Q5S007 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.2■□□□□ 0.66
LRRK2Q5S007 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRK2Q5S007 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LRRK2Q5S007 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRK2Q5S007 AC092803.2-201ENST00000564287 1899 ntBASIC19.2■□□□□ 0.66
LRRK2Q5S007 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRK2Q5S007 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRK2Q5S007 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.2■□□□□ 0.66
LRRK2Q5S007 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRK2Q5S007 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRRK2Q5S007 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRK2Q5S007 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRK2Q5S007 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRRK2Q5S007 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRK2Q5S007 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRK2Q5S007 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRRK2Q5S007 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRK2Q5S007 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRK2Q5S007 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRK2Q5S007 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRK2Q5S007 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRK2Q5S007 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRK2Q5S007 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRK2Q5S007 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRRK2Q5S007 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.19■□□□□ 0.66
LRRK2Q5S007 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRK2Q5S007 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRK2Q5S007 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRK2Q5S007 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.18■□□□□ 0.66
LRRK2Q5S007 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.18■□□□□ 0.66
LRRK2Q5S007 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRK2Q5S007 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LRRK2Q5S007 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRK2Q5S007 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRK2Q5S007 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRRK2Q5S007 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRK2Q5S007 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRK2Q5S007 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRRK2Q5S007 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LRRK2Q5S007 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRK2Q5S007 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRK2Q5S007 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRK2Q5S007 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRK2Q5S007 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRK2Q5S007 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LRRK2Q5S007 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRK2Q5S007 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRK2Q5S007 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRK2Q5S007 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRK2Q5S007 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRK2Q5S007 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRK2Q5S007 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LRRK2Q5S007 AC144652.1-201ENST00000609974 1624 ntBASIC19.16■□□□□ 0.66
LRRK2Q5S007 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRK2Q5S007 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LRRK2Q5S007 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LRRK2Q5S007 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRK2Q5S007 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRK2Q5S007 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LRRK2Q5S007 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRK2Q5S007 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRK2Q5S007 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.16■□□□□ 0.66
LRRK2Q5S007 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRK2Q5S007 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.16■□□□□ 0.66
LRRK2Q5S007 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRK2Q5S007 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRK2Q5S007 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRK2Q5S007 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRK2Q5S007 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRK2Q5S007 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LRRK2Q5S007 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRK2Q5S007 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LRRK2Q5S007 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRK2Q5S007 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRK2Q5S007 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRK2Q5S007 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRK2Q5S007 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRK2Q5S007 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRK2Q5S007 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.15■□□□□ 0.66
LRRK2Q5S007 OR10C1-204ENST00000622521 1039 ntBASIC19.15■□□□□ 0.66
LRRK2Q5S007 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRK2Q5S007 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRK2Q5S007 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.14■□□□□ 0.66
LRRK2Q5S007 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRRK2Q5S007 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRK2Q5S007 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRK2Q5S007 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LRRK2Q5S007 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.14■□□□□ 0.65
LRRK2Q5S007 CYP2T1P-201ENST00000432607 1285 ntBASIC19.14■□□□□ 0.65
LRRK2Q5S007 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.14■□□□□ 0.65
LRRK2Q5S007 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRK2Q5S007 AC007322.4-201ENST00000509611 723 ntBASIC19.14■□□□□ 0.65
LRRK2Q5S007 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms