Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
EFNB3Q15768 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
EFNB3Q15768 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.59■□□□□ 0.57
EFNB3Q15768 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.59■□□□□ 0.57
EFNB3Q15768 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EFNB3Q15768 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
EFNB3Q15768 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EFNB3Q15768 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
EFNB3Q15768 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
EFNB3Q15768 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EFNB3Q15768 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EFNB3Q15768 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.58■□□□□ 0.56
EFNB3Q15768 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EFNB3Q15768 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
EFNB3Q15768 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
EFNB3Q15768 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
EFNB3Q15768 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.58■□□□□ 0.56
EFNB3Q15768 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.58■□□□□ 0.56
EFNB3Q15768 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.58■□□□□ 0.56
EFNB3Q15768 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.58■□□□□ 0.56
EFNB3Q15768 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EFNB3Q15768 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
EFNB3Q15768 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EFNB3Q15768 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EFNB3Q15768 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
EFNB3Q15768 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EFNB3Q15768 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EFNB3Q15768 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EFNB3Q15768 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EFNB3Q15768 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
EFNB3Q15768 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
EFNB3Q15768 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EFNB3Q15768 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EFNB3Q15768 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
EFNB3Q15768 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
EFNB3Q15768 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
EFNB3Q15768 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFNB3Q15768 AC068473.5-201ENST00000616428 2072 ntBASIC18.56■□□□□ 0.56
EFNB3Q15768 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.56■□□□□ 0.56
EFNB3Q15768 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFNB3Q15768 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFNB3Q15768 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EFNB3Q15768 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
EFNB3Q15768 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EFNB3Q15768 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.56■□□□□ 0.56
EFNB3Q15768 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.56■□□□□ 0.56
EFNB3Q15768 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.56■□□□□ 0.56
EFNB3Q15768 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFNB3Q15768 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EFNB3Q15768 LINC01960-201ENST00000563759 1884 ntBASIC18.56■□□□□ 0.56
EFNB3Q15768 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFNB3Q15768 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
EFNB3Q15768 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
EFNB3Q15768 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFNB3Q15768 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
EFNB3Q15768 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFNB3Q15768 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFNB3Q15768 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EFNB3Q15768 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFNB3Q15768 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFNB3Q15768 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFNB3Q15768 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFNB3Q15768 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
EFNB3Q15768 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
EFNB3Q15768 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EFNB3Q15768 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EFNB3Q15768 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.54■□□□□ 0.56
EFNB3Q15768 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EFNB3Q15768 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.54■□□□□ 0.56
EFNB3Q15768 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.54■□□□□ 0.56
EFNB3Q15768 NTF6G-201ENST00000591094 616 ntBASIC18.54■□□□□ 0.56
EFNB3Q15768 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EFNB3Q15768 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.54■□□□□ 0.56
EFNB3Q15768 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
EFNB3Q15768 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
EFNB3Q15768 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.53■□□□□ 0.56
EFNB3Q15768 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
EFNB3Q15768 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.53■□□□□ 0.56
EFNB3Q15768 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
EFNB3Q15768 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
EFNB3Q15768 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
EFNB3Q15768 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
EFNB3Q15768 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.53■□□□□ 0.56
EFNB3Q15768 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EFNB3Q15768 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.53■□□□□ 0.56
EFNB3Q15768 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms