Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 YGL152CYGL152C 678 nt4.06□□□□□ -1.76
RPA49Q01080 YIL025CYIL025C 375 nt4.06□□□□□ -1.76
RPA49Q01080 ELF1YKL160W 438 nt4.06□□□□□ -1.76
RPA49Q01080 SWC7YLR385C 399 nt4.06□□□□□ -1.76
RPA49Q01080 SEC65YML105C 822 nt4.06□□□□□ -1.76
RPA49Q01080 ASI2YNL159C 870 nt4.06□□□□□ -1.76
RPA49Q01080 POC4YPL144W 447 nt4.06□□□□□ -1.76
RPA49Q01080 MUM2YBR057C 1101 nt4.06□□□□□ -1.76
RPA49Q01080 YCL001W-AYCL001W-A 462 nt4.06□□□□□ -1.76
RPA49Q01080 RPB2YOR151C 3675 nt4.06□□□□□ -1.76
RPA49Q01080 GAL11YOL051W 3246 nt4.06□□□□□ -1.76
RPA49Q01080 NOC2YOR206W 2133 nt4.06□□□□□ -1.76
RPA49Q01080 MTC4YBR255W 2085 nt4.06□□□□□ -1.76
RPA49Q01080 CLG1YGL215W 1359 nt4.05□□□□□ -1.76
RPA49Q01080 AIM14YGL160W 1713 nt4.05□□□□□ -1.76
RPA49Q01080 YKR015CYKR015C 1707 nt4.05□□□□□ -1.76
RPA49Q01080 YDR133CYDR133C 336 nt4.05□□□□□ -1.76
RPA49Q01080 HSP42YDR171W 1128 nt4.05□□□□□ -1.76
RPA49Q01080 YGL132WYGL132W 336 nt4.05□□□□□ -1.76
RPA49Q01080 BIO2YGR286C 1128 nt4.05□□□□□ -1.76
RPA49Q01080 RSF1YMR030W 1131 nt4.05□□□□□ -1.76
RPA49Q01080 CYC2YOR037W 1101 nt4.05□□□□□ -1.76
RPA49Q01080 YPL162CYPL162C 822 nt4.05□□□□□ -1.76
RPA49Q01080 SUT2YPR009W 807 nt4.05□□□□□ -1.76
RPA49Q01080 HAP4YKL109W 1665 nt4.05□□□□□ -1.76
RPA49Q01080 ALO1YML086C 1581 nt4.05□□□□□ -1.76
RPA49Q01080 VPS27YNR006W 1869 nt4.05□□□□□ -1.76
RPA49Q01080 COP1YDL145C 3606 nt4.04□□□□□ -1.76
RPA49Q01080 AGA1YNR044W 2178 nt4.04□□□□□ -1.76
RPA49Q01080 SSU1YPL092W 1377 nt4.04□□□□□ -1.76
RPA49Q01080 NOP6YDL213C 678 nt4.04□□□□□ -1.76
RPA49Q01080 YAL065CYAL065C 387 nt4.04□□□□□ -1.76
RPA49Q01080 YLR042CYLR042C 486 nt4.04□□□□□ -1.76
RPA49Q01080 MRPS17YMR188C 714 nt4.04□□□□□ -1.76
RPA49Q01080 TOM7YNL070W 183 nt4.04□□□□□ -1.76
RPA49Q01080 IDI1YPL117C 867 nt4.04□□□□□ -1.76
RPA49Q01080 SEN1YLR430W 6696 nt4.04□□□□□ -1.76
RPA49Q01080 NUP133YKR082W 3474 nt4.04□□□□□ -1.76
RPA49Q01080 NOG1YPL093W 1944 nt4.03□□□□□ -1.76
RPA49Q01080 PCL2YDL127W 927 nt4.03□□□□□ -1.76
RPA49Q01080 SPI1YER150W 447 nt4.03□□□□□ -1.76
RPA49Q01080 RPS0AYGR214W 759 nt4.03□□□□□ -1.76
RPA49Q01080 REC104YHR157W 549 nt4.03□□□□□ -1.76
RPA49Q01080 MTD1YKR080W 963 nt4.03□□□□□ -1.76
RPA49Q01080 PSF3YOL146W 585 nt4.03□□□□□ -1.76
RPA49Q01080 SSP2YOR242C 1116 nt4.03□□□□□ -1.76
RPA49Q01080 RFM1YOR279C 933 nt4.03□□□□□ -1.76
RPA49Q01080 TED1YIL039W 1422 nt4.03□□□□□ -1.76
RPA49Q01080 RNA14YMR061W 2034 nt4.02□□□□□ -1.77
RPA49Q01080 RRI1YDL216C 1323 nt4.02□□□□□ -1.77
RPA49Q01080 RRG1YDR065W 1098 nt4.02□□□□□ -1.77
RPA49Q01080 BCP1YDR361C 852 nt4.02□□□□□ -1.77
RPA49Q01080 YER034WYER034W 558 nt4.02□□□□□ -1.77
RPA49Q01080 YER076CYER076C 909 nt4.02□□□□□ -1.77
RPA49Q01080 ERV29YGR284C 933 nt4.02□□□□□ -1.77
RPA49Q01080 REE1YJL217W 597 nt4.02□□□□□ -1.77
RPA49Q01080 AAD10YJR155W 867 nt4.02□□□□□ -1.77
RPA49Q01080 MCM1YMR043W 861 nt4.02□□□□□ -1.77
RPA49Q01080 YMR085WYMR085W 1299 nt4.02□□□□□ -1.77
RPA49Q01080 CUZ1YNL155W 825 nt4.02□□□□□ -1.77
RPA49Q01080 ECM8YBR076W 1065 nt4.02□□□□□ -1.77
RPA49Q01080 YPR142CYPR142C 564 nt4.02□□□□□ -1.77
RPA49Q01080 ERG5YMR015C 1617 nt4.02□□□□□ -1.77
RPA49Q01080 VMA1YDL185W 3216 nt4.02□□□□□ -1.77
RPA49Q01080 PUB1YNL016W 1362 nt4.02□□□□□ -1.77
RPA49Q01080 DSL1YNL258C 2265 nt4.01□□□□□ -1.77
RPA49Q01080 PST1YDR055W 1335 nt4.01□□□□□ -1.77
RPA49Q01080 RRP14YKL082C 1305 nt4.01□□□□□ -1.77
RPA49Q01080 HCM1YCR065W 1695 nt4.01□□□□□ -1.77
RPA49Q01080 FAT1YBR041W 2010 nt4.01□□□□□ -1.77
RPA49Q01080 RCR2YDR003W 633 nt4.01□□□□□ -1.77
RPA49Q01080 LSM12YHR121W 564 nt4.01□□□□□ -1.77
RPA49Q01080 SOL3YHR163W 750 nt4.01□□□□□ -1.77
RPA49Q01080 MDM12YOL009C 816 nt4.01□□□□□ -1.77
RPA49Q01080 RAD54YGL163C 2697 nt4.01□□□□□ -1.77
RPA49Q01080 GAC1YOR178C 2382 nt4□□□□□ -1.77
RPA49Q01080 MNR2YKL064W 2910 nt4□□□□□ -1.77
RPA49Q01080 ISW2YOR304W 3363 nt4□□□□□ -1.77
RPA49Q01080 YCR085WYCR085W 354 nt4□□□□□ -1.77
RPA49Q01080 RPC11YDR045C 333 nt4□□□□□ -1.77
RPA49Q01080 OTU1YFL044C 906 nt4□□□□□ -1.77
RPA49Q01080 CAB2YIL083C 1098 nt4□□□□□ -1.77
RPA49Q01080 GMH1YKR030W 822 nt4□□□□□ -1.77
RPA49Q01080 COQ5YML110C 924 nt4□□□□□ -1.77
RPA49Q01080 YOR114WYOR114W 885 nt4□□□□□ -1.77
RPA49Q01080 YPL077CYPL077C 723 nt4□□□□□ -1.77
RPA49Q01080 DSS1YMR287C 2910 nt4□□□□□ -1.77
RPA49Q01080 MCM7YBR202W 2538 nt3.99□□□□□ -1.77
RPA49Q01080 KTR6YPL053C 1341 nt3.99□□□□□ -1.77
RPA49Q01080 RPP1AYDL081C 321 nt3.99□□□□□ -1.77
RPA49Q01080 RDI1YDL135C 609 nt3.99□□□□□ -1.77
RPA49Q01080 RPB3YIL021W 957 nt3.99□□□□□ -1.77
RPA49Q01080 POP8YBL018C 402 nt3.99□□□□□ -1.77
RPA49Q01080 YNR071CYNR071C 1029 nt3.99□□□□□ -1.77
RPA49Q01080 RAD1YPL022W 3303 nt3.98□□□□□ -1.77
RPA49Q01080 SER3YER081W 1410 nt3.98□□□□□ -1.77
RPA49Q01080 BCK2YER167W 2556 nt3.98□□□□□ -1.77
RPA49Q01080 PPE1YHR075C 1203 nt3.98□□□□□ -1.77
RPA49Q01080 RSM25YIL093C 795 nt3.98□□□□□ -1.77
RPA49Q01080 MTR2YKL186C 555 nt3.98□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms