Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3AP84243 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3AP84243 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3AP84243 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3AP84243 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
H3F3AP84243 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3AP84243 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3AP84243 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
H3F3AP84243 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3AP84243 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3AP84243 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3AP84243 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.46■□□□□ 0.71
H3F3AP84243 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3AP84243 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.46■□□□□ 0.71
H3F3AP84243 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.46■□□□□ 0.71
H3F3AP84243 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3AP84243 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3AP84243 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
H3F3AP84243 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3AP84243 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
H3F3AP84243 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3AP84243 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3AP84243 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3AP84243 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3AP84243 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.45■□□□□ 0.7
H3F3AP84243 AC079089.2-201ENST00000531211 1277 ntBASIC19.45■□□□□ 0.7
H3F3AP84243 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3AP84243 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3AP84243 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
H3F3AP84243 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3AP84243 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3AP84243 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3AP84243 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
H3F3AP84243 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
H3F3AP84243 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
H3F3AP84243 GUSBP5-202ENST00000510805 1989 ntBASIC19.44■□□□□ 0.7
H3F3AP84243 AC080038.3-201ENST00000623346 1952 ntBASIC19.44■□□□□ 0.7
H3F3AP84243 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3AP84243 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.44■□□□□ 0.7
H3F3AP84243 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3AP84243 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
H3F3AP84243 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3AP84243 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3AP84243 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3AP84243 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3AP84243 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
H3F3AP84243 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.44■□□□□ 0.7
H3F3AP84243 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.44■□□□□ 0.7
H3F3AP84243 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.44■□□□□ 0.7
H3F3AP84243 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3AP84243 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.44■□□□□ 0.7
H3F3AP84243 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.44■□□□□ 0.7
H3F3AP84243 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
H3F3AP84243 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3AP84243 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3AP84243 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.44■□□□□ 0.7
H3F3AP84243 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
H3F3AP84243 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.44■□□□□ 0.7
H3F3AP84243 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3AP84243 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3AP84243 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
H3F3AP84243 AC139530.1-201ENST00000575312 1977 ntBASIC19.43■□□□□ 0.7
H3F3AP84243 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
H3F3AP84243 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3AP84243 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.43■□□□□ 0.7
H3F3AP84243 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3AP84243 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3AP84243 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3AP84243 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.43■□□□□ 0.7
H3F3AP84243 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.43■□□□□ 0.7
H3F3AP84243 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.43■□□□□ 0.7
H3F3AP84243 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
H3F3AP84243 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3AP84243 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3AP84243 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3AP84243 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
H3F3AP84243 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3AP84243 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3AP84243 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
H3F3AP84243 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
H3F3AP84243 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3AP84243 AC242852.2-201ENST00000615738 1807 ntBASIC19.42■□□□□ 0.7
H3F3AP84243 LINC00526-201ENST00000581067 1875 ntBASIC19.42■□□□□ 0.7
H3F3AP84243 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.42■□□□□ 0.7
H3F3AP84243 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.42■□□□□ 0.7
H3F3AP84243 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3AP84243 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.42■□□□□ 0.7
H3F3AP84243 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3AP84243 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3AP84243 TSPY26P-201ENST00000476365 1326 ntBASIC19.42■□□□□ 0.7
H3F3AP84243 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3AP84243 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3F3AP84243 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H3F3AP84243 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
H3F3AP84243 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.41■□□□□ 0.7
H3F3AP84243 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H3F3AP84243 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H3F3AP84243 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H3F3AP84243 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
H3F3AP84243 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms