Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS27AP62979 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS27AP62979 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS27AP62979 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RPS27AP62979 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RPS27AP62979 AL031848.2-201ENST00000607670 837 ntBASIC18.67■□□□□ 0.58
RPS27AP62979 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RPS27AP62979 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS27AP62979 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPS27AP62979 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS27AP62979 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.67■□□□□ 0.58
RPS27AP62979 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.67■□□□□ 0.58
RPS27AP62979 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS27AP62979 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPS27AP62979 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.66■□□□□ 0.58
RPS27AP62979 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.66■□□□□ 0.58
RPS27AP62979 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS27AP62979 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
RPS27AP62979 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS27AP62979 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS27AP62979 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS27AP62979 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.66■□□□□ 0.58
RPS27AP62979 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.66■□□□□ 0.58
RPS27AP62979 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.66■□□□□ 0.58
RPS27AP62979 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.66■□□□□ 0.58
RPS27AP62979 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.66■□□□□ 0.58
RPS27AP62979 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS27AP62979 AC021242.3-201ENST00000607598 1377 ntBASIC18.66■□□□□ 0.58
RPS27AP62979 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RPS27AP62979 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS27AP62979 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS27AP62979 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS27AP62979 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RPS27AP62979 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPS27AP62979 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS27AP62979 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.65■□□□□ 0.58
RPS27AP62979 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPS27AP62979 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RPS27AP62979 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
RPS27AP62979 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RPS27AP62979 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS27AP62979 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.65■□□□□ 0.58
RPS27AP62979 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RPS27AP62979 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.65■□□□□ 0.58
RPS27AP62979 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RPS27AP62979 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.65■□□□□ 0.58
RPS27AP62979 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS27AP62979 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RPS27AP62979 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RPS27AP62979 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.65■□□□□ 0.58
RPS27AP62979 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RPS27AP62979 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RPS27AP62979 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.64■□□□□ 0.58
RPS27AP62979 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RPS27AP62979 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
RPS27AP62979 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RPS27AP62979 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.64■□□□□ 0.57
RPS27AP62979 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.64■□□□□ 0.57
RPS27AP62979 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.64■□□□□ 0.57
RPS27AP62979 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RPS27AP62979 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.64■□□□□ 0.57
RPS27AP62979 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS27AP62979 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.64■□□□□ 0.57
RPS27AP62979 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS27AP62979 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.64■□□□□ 0.57
RPS27AP62979 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS27AP62979 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.64■□□□□ 0.57
RPS27AP62979 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RPS27AP62979 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RPS27AP62979 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPS27AP62979 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS27AP62979 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPS27AP62979 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.63■□□□□ 0.57
RPS27AP62979 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.63■□□□□ 0.57
RPS27AP62979 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RPS27AP62979 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.63■□□□□ 0.57
RPS27AP62979 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RPS27AP62979 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.63■□□□□ 0.57
RPS27AP62979 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS27AP62979 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.63■□□□□ 0.57
RPS27AP62979 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RPS27AP62979 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RPS27AP62979 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RPS27AP62979 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RPS27AP62979 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.63■□□□□ 0.57
RPS27AP62979 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS27AP62979 AC010542.4-201ENST00000563151 1910 ntBASIC18.62■□□□□ 0.57
RPS27AP62979 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS27AP62979 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.62■□□□□ 0.57
RPS27AP62979 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPS27AP62979 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS27AP62979 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS27AP62979 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.62■□□□□ 0.57
RPS27AP62979 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS27AP62979 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS27AP62979 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RPS27AP62979 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS27AP62979 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPS27AP62979 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.62■□□□□ 0.57
RPS27AP62979 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms