Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ZC3H6P61129 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC29.42■■■□□ 2.3
ZC3H6P61129 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC29.42■■■□□ 2.3
ZC3H6P61129 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
ZC3H6P61129 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ZC3H6P61129 AC069152.1-201ENST00000438030 544 ntBASIC29.41■■■□□ 2.3
ZC3H6P61129 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
ZC3H6P61129 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.41■■■□□ 2.3
ZC3H6P61129 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
ZC3H6P61129 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC29.41■■■□□ 2.3
ZC3H6P61129 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ZC3H6P61129 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
ZC3H6P61129 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ZC3H6P61129 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ZC3H6P61129 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
ZC3H6P61129 PXK-203ENST00000383715 1756 ntTSL 5 BASIC29.4■■■□□ 2.3
ZC3H6P61129 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC29.4■■■□□ 2.3
ZC3H6P61129 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
ZC3H6P61129 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
ZC3H6P61129 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ZC3H6P61129 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.4■■■□□ 2.3
ZC3H6P61129 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC29.39■■■□□ 2.3
ZC3H6P61129 SLC29A4P1-201ENST00000398760 971 ntBASIC29.39■■■□□ 2.3
ZC3H6P61129 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC29.39■■■□□ 2.3
ZC3H6P61129 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC29.39■■■□□ 2.3
ZC3H6P61129 PFKL-212ENST00000628044 129 ntTSL 3 BASIC29.39■■■□□ 2.3
ZC3H6P61129 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ZC3H6P61129 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
ZC3H6P61129 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
ZC3H6P61129 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
ZC3H6P61129 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
ZC3H6P61129 BRI3-207ENST00000539286 699 ntTSL 2 BASIC29.38■■■□□ 2.29
ZC3H6P61129 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
ZC3H6P61129 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC29.38■■■□□ 2.29
ZC3H6P61129 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC29.38■■■□□ 2.29
ZC3H6P61129 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
ZC3H6P61129 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
ZC3H6P61129 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ZC3H6P61129 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC29.37■■■□□ 2.29
ZC3H6P61129 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC29.37■■■□□ 2.29
ZC3H6P61129 AC098934.4-201ENST00000564127 592 ntBASIC29.37■■■□□ 2.29
ZC3H6P61129 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC29.37■■■□□ 2.29
ZC3H6P61129 MYCNOS-205ENST00000641950 531 ntBASIC29.37■■■□□ 2.29
ZC3H6P61129 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
ZC3H6P61129 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ZC3H6P61129 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC29.36■■■□□ 2.29
ZC3H6P61129 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
ZC3H6P61129 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ZC3H6P61129 H19-210ENST00000439725 1929 ntTSL 2 BASIC29.36■■■□□ 2.29
ZC3H6P61129 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC29.36■■■□□ 2.29
ZC3H6P61129 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC29.36■■■□□ 2.29
ZC3H6P61129 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
ZC3H6P61129 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ZC3H6P61129 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
ZC3H6P61129 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
ZC3H6P61129 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
ZC3H6P61129 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
ZC3H6P61129 RGMA-211ENST00000557420 989 ntTSL 3 BASIC29.35■■■□□ 2.29
ZC3H6P61129 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC29.35■■■□□ 2.29
ZC3H6P61129 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC29.35■■■□□ 2.29
ZC3H6P61129 AP001160.3-201ENST00000601484 763 ntBASIC29.35■■■□□ 2.29
ZC3H6P61129 LINC00543-201ENST00000567234 1845 ntBASIC29.35■■■□□ 2.29
ZC3H6P61129 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
ZC3H6P61129 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
ZC3H6P61129 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ZC3H6P61129 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
ZC3H6P61129 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
ZC3H6P61129 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
ZC3H6P61129 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC29.34■■■□□ 2.29
ZC3H6P61129 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC29.34■■■□□ 2.29
ZC3H6P61129 AC009237.3-201ENST00000393279 1427 ntBASIC29.34■■■□□ 2.29
ZC3H6P61129 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ZC3H6P61129 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ZC3H6P61129 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ZC3H6P61129 CNN2P6-201ENST00000439038 900 ntBASIC29.33■■■□□ 2.29
ZC3H6P61129 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC29.33■■■□□ 2.29
ZC3H6P61129 FAM201B-201ENST00000458407 597 ntBASIC29.33■■■□□ 2.29
ZC3H6P61129 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ZC3H6P61129 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ZC3H6P61129 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
ZC3H6P61129 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC29.32■■■□□ 2.28
ZC3H6P61129 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ZC3H6P61129 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC29.32■■■□□ 2.28
ZC3H6P61129 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
ZC3H6P61129 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ZC3H6P61129 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
ZC3H6P61129 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
ZC3H6P61129 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ZC3H6P61129 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC29.32■■■□□ 2.28
ZC3H6P61129 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC29.32■■■□□ 2.28
ZC3H6P61129 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
ZC3H6P61129 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ZC3H6P61129 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC29.32■■■□□ 2.28
ZC3H6P61129 AC004812.2-201ENST00000611079 2094 ntBASIC29.32■■■□□ 2.28
ZC3H6P61129 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ZC3H6P61129 DUSP8P3-201ENST00000399571 1760 ntBASIC29.31■■■□□ 2.28
ZC3H6P61129 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC29.31■■■□□ 2.28
ZC3H6P61129 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC29.31■■■□□ 2.28
ZC3H6P61129 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC29.31■■■□□ 2.28
ZC3H6P61129 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms