Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
WNT3AP56704 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
WNT3AP56704 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.11
WNT3AP56704 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
WNT3AP56704 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
WNT3AP56704 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
WNT3AP56704 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
WNT3AP56704 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
WNT3AP56704 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
WNT3AP56704 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
WNT3AP56704 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
WNT3AP56704 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.01■■□□□ 1.11
WNT3AP56704 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.01■■□□□ 1.11
WNT3AP56704 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
WNT3AP56704 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
WNT3AP56704 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
WNT3AP56704 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
WNT3AP56704 BX842568.3-201ENST00000418104 571 ntBASIC22.01■■□□□ 1.11
WNT3AP56704 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.01■■□□□ 1.11
WNT3AP56704 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
WNT3AP56704 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
WNT3AP56704 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
WNT3AP56704 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
WNT3AP56704 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
WNT3AP56704 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
WNT3AP56704 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
WNT3AP56704 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
WNT3AP56704 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
WNT3AP56704 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
WNT3AP56704 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22■■□□□ 1.11
WNT3AP56704 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
WNT3AP56704 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
WNT3AP56704 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
WNT3AP56704 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
WNT3AP56704 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22■■□□□ 1.11
WNT3AP56704 AC010141.3-201ENST00000456659 717 ntBASIC22■■□□□ 1.11
WNT3AP56704 AP005435.1-201ENST00000529293 1178 ntBASIC22■■□□□ 1.11
WNT3AP56704 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22■■□□□ 1.11
WNT3AP56704 AC087239.1-201ENST00000622671 572 ntBASIC22■■□□□ 1.11
WNT3AP56704 AC092053.2-201ENST00000640557 1818 ntBASIC22■■□□□ 1.11
WNT3AP56704 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22■■□□□ 1.11
WNT3AP56704 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
WNT3AP56704 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22■■□□□ 1.11
WNT3AP56704 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22■■□□□ 1.11
WNT3AP56704 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22■■□□□ 1.11
WNT3AP56704 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
WNT3AP56704 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
WNT3AP56704 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
WNT3AP56704 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
WNT3AP56704 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
WNT3AP56704 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.99■■□□□ 1.11
WNT3AP56704 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.99■■□□□ 1.11
WNT3AP56704 AC079089.2-201ENST00000531211 1277 ntBASIC21.99■■□□□ 1.11
WNT3AP56704 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.99■■□□□ 1.11
WNT3AP56704 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.99■■□□□ 1.11
WNT3AP56704 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
WNT3AP56704 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
WNT3AP56704 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.99■■□□□ 1.11
WNT3AP56704 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
WNT3AP56704 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.98■■□□□ 1.11
WNT3AP56704 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
WNT3AP56704 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
WNT3AP56704 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
WNT3AP56704 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
WNT3AP56704 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.98■■□□□ 1.11
WNT3AP56704 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
WNT3AP56704 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
WNT3AP56704 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.98■■□□□ 1.11
WNT3AP56704 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.98■■□□□ 1.11
WNT3AP56704 AC233992.3-201ENST00000607491 485 ntBASIC21.98■■□□□ 1.11
WNT3AP56704 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.98■■□□□ 1.11
WNT3AP56704 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
WNT3AP56704 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
WNT3AP56704 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
WNT3AP56704 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.97■■□□□ 1.11
WNT3AP56704 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.97■■□□□ 1.11
WNT3AP56704 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
WNT3AP56704 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
WNT3AP56704 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
WNT3AP56704 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
WNT3AP56704 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.97■■□□□ 1.11
WNT3AP56704 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
WNT3AP56704 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
WNT3AP56704 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
WNT3AP56704 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
WNT3AP56704 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
WNT3AP56704 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
WNT3AP56704 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
WNT3AP56704 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
WNT3AP56704 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.96■■□□□ 1.11
WNT3AP56704 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
WNT3AP56704 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
WNT3AP56704 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
WNT3AP56704 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
WNT3AP56704 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
WNT3AP56704 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
WNT3AP56704 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
WNT3AP56704 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
WNT3AP56704 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.95■■□□□ 1.1
WNT3AP56704 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms