Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXG1P55316 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.12■□□□□ 0.65
FOXG1P55316 AC137767.1-201ENST00000602918 1920 ntBASIC19.12■□□□□ 0.65
FOXG1P55316 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
FOXG1P55316 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXG1P55316 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXG1P55316 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXG1P55316 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXG1P55316 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXG1P55316 RARRES2P6-201ENST00000567333 442 ntBASIC19.12■□□□□ 0.65
FOXG1P55316 SMUG1P1-201ENST00000590640 811 ntBASIC19.12■□□□□ 0.65
FOXG1P55316 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXG1P55316 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.12■□□□□ 0.65
FOXG1P55316 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXG1P55316 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
FOXG1P55316 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXG1P55316 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXG1P55316 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXG1P55316 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXG1P55316 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXG1P55316 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
FOXG1P55316 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
FOXG1P55316 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXG1P55316 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXG1P55316 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXG1P55316 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXG1P55316 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXG1P55316 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXG1P55316 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
FOXG1P55316 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.11■□□□□ 0.65
FOXG1P55316 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXG1P55316 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FOXG1P55316 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXG1P55316 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
FOXG1P55316 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXG1P55316 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXG1P55316 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXG1P55316 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXG1P55316 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXG1P55316 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
FOXG1P55316 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXG1P55316 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
FOXG1P55316 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.1■□□□□ 0.65
FOXG1P55316 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXG1P55316 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.09■□□□□ 0.65
FOXG1P55316 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXG1P55316 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
FOXG1P55316 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
FOXG1P55316 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXG1P55316 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
FOXG1P55316 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXG1P55316 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.09■□□□□ 0.65
FOXG1P55316 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXG1P55316 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXG1P55316 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXG1P55316 AC079089.2-201ENST00000531211 1277 ntBASIC19.09■□□□□ 0.65
FOXG1P55316 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXG1P55316 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.09■□□□□ 0.65
FOXG1P55316 AL358852.1-201ENST00000623174 1268 ntBASIC19.09■□□□□ 0.65
FOXG1P55316 AC080038.3-201ENST00000623346 1952 ntBASIC19.09■□□□□ 0.65
FOXG1P55316 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXG1P55316 LINC00526-201ENST00000581067 1875 ntBASIC19.09■□□□□ 0.65
FOXG1P55316 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXG1P55316 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXG1P55316 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXG1P55316 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXG1P55316 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXG1P55316 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
FOXG1P55316 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FOXG1P55316 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.08■□□□□ 0.65
FOXG1P55316 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FOXG1P55316 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.08■□□□□ 0.64
FOXG1P55316 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.08■□□□□ 0.64
FOXG1P55316 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.08■□□□□ 0.64
FOXG1P55316 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.08■□□□□ 0.64
FOXG1P55316 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
FOXG1P55316 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXG1P55316 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXG1P55316 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXG1P55316 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXG1P55316 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
FOXG1P55316 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXG1P55316 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXG1P55316 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXG1P55316 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXG1P55316 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXG1P55316 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXG1P55316 AC087623.3-201ENST00000607047 1098 ntBASIC19.07■□□□□ 0.64
FOXG1P55316 AL354811.1-201ENST00000610286 706 ntBASIC19.07■□□□□ 0.64
FOXG1P55316 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXG1P55316 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXG1P55316 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXG1P55316 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXG1P55316 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.06■□□□□ 0.64
FOXG1P55316 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXG1P55316 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
FOXG1P55316 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.06■□□□□ 0.64
FOXG1P55316 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
FOXG1P55316 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
FOXG1P55316 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms