Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCNKAP51800 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLCNKAP51800 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCNKAP51800 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CLCNKAP51800 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCNKAP51800 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCNKAP51800 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.34■■□□□ 1.01
CLCNKAP51800 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLCNKAP51800 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.34■■□□□ 1.01
CLCNKAP51800 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.34■■□□□ 1.01
CLCNKAP51800 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.34■■□□□ 1.01
CLCNKAP51800 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.34■■□□□ 1.01
CLCNKAP51800 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.34■■□□□ 1.01
CLCNKAP51800 MIR6084-201ENST00000622012 110 ntBASIC21.34■■□□□ 1.01
CLCNKAP51800 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCNKAP51800 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLCNKAP51800 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLCNKAP51800 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCNKAP51800 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLCNKAP51800 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.33■■□□□ 1.01
CLCNKAP51800 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLCNKAP51800 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLCNKAP51800 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.33■■□□□ 1.01
CLCNKAP51800 SMUG1P1-201ENST00000590640 811 ntBASIC21.33■■□□□ 1.01
CLCNKAP51800 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.33■■□□□ 1.01
CLCNKAP51800 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.33■■□□□ 1
CLCNKAP51800 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CLCNKAP51800 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.33■■□□□ 1
CLCNKAP51800 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.32■■□□□ 1
CLCNKAP51800 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLCNKAP51800 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCNKAP51800 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CLCNKAP51800 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCNKAP51800 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.32■■□□□ 1
CLCNKAP51800 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.32■■□□□ 1
CLCNKAP51800 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CLCNKAP51800 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLCNKAP51800 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.32■■□□□ 1
CLCNKAP51800 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CLCNKAP51800 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLCNKAP51800 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCNKAP51800 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.31■■□□□ 1
CLCNKAP51800 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLCNKAP51800 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CLCNKAP51800 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CLCNKAP51800 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
CLCNKAP51800 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.31■■□□□ 1
CLCNKAP51800 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.31■■□□□ 1
CLCNKAP51800 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCNKAP51800 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.31■■□□□ 1
CLCNKAP51800 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.31■■□□□ 1
CLCNKAP51800 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLCNKAP51800 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLCNKAP51800 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.31■■□□□ 1
CLCNKAP51800 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.3■■□□□ 1
CLCNKAP51800 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLCNKAP51800 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLCNKAP51800 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CLCNKAP51800 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.3■■□□□ 1
CLCNKAP51800 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.3■■□□□ 1
CLCNKAP51800 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CLCNKAP51800 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CLCNKAP51800 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.29■■□□□ 1
CLCNKAP51800 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLCNKAP51800 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLCNKAP51800 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CLCNKAP51800 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.29■■□□□ 1
CLCNKAP51800 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.29■■□□□ 1
CLCNKAP51800 LINC02228-203ENST00000641970 1355 ntBASIC21.29■■□□□ 1
CLCNKAP51800 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
CLCNKAP51800 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CLCNKAP51800 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CLCNKAP51800 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.29■■□□□ 1
CLCNKAP51800 AC034268.1-201ENST00000441047 882 ntBASIC21.29■■□□□ 1
CLCNKAP51800 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLCNKAP51800 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CLCNKAP51800 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CLCNKAP51800 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLCNKAP51800 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLCNKAP51800 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CLCNKAP51800 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLCNKAP51800 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLCNKAP51800 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CLCNKAP51800 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CLCNKAP51800 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLCNKAP51800 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.28■■□□□ 1
CLCNKAP51800 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLCNKAP51800 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.28■■□□□ 1
CLCNKAP51800 TPRG1LP1-201ENST00000598702 760 ntBASIC21.28■■□□□ 1
CLCNKAP51800 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.28■■□□□ 1
CLCNKAP51800 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLCNKAP51800 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLCNKAP51800 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CLCNKAP51800 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLCNKAP51800 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLCNKAP51800 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLCNKAP51800 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CLCNKAP51800 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLCNKAP51800 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.27■■□□□ 1
CLCNKAP51800 AC079089.2-201ENST00000531211 1277 ntBASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms