Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.49■□□□□ 0.55
MECP2P51608 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MECP2P51608 KRT18P60-201ENST00000312876 1297 ntBASIC18.49■□□□□ 0.55
MECP2P51608 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.49■□□□□ 0.55
MECP2P51608 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MECP2P51608 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MECP2P51608 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MECP2P51608 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MECP2P51608 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.49■□□□□ 0.55
MECP2P51608 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MECP2P51608 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
MECP2P51608 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MECP2P51608 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MECP2P51608 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MECP2P51608 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MECP2P51608 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MECP2P51608 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MECP2P51608 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
MECP2P51608 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.48■□□□□ 0.55
MECP2P51608 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MECP2P51608 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MECP2P51608 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
MECP2P51608 RPS2P7-201ENST00000447334 885 ntBASIC18.48■□□□□ 0.55
MECP2P51608 AL592293.1-201ENST00000502889 1188 ntBASIC18.48■□□□□ 0.55
MECP2P51608 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.48■□□□□ 0.55
MECP2P51608 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MECP2P51608 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MECP2P51608 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.48■□□□□ 0.55
MECP2P51608 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MECP2P51608 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.48■□□□□ 0.55
MECP2P51608 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
MECP2P51608 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
MECP2P51608 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MECP2P51608 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
MECP2P51608 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MECP2P51608 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MECP2P51608 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.47■□□□□ 0.55
MECP2P51608 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
MECP2P51608 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MECP2P51608 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MECP2P51608 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MECP2P51608 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
MECP2P51608 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MECP2P51608 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MECP2P51608 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.47■□□□□ 0.55
MECP2P51608 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.46■□□□□ 0.55
MECP2P51608 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.46■□□□□ 0.55
MECP2P51608 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MECP2P51608 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MECP2P51608 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
MECP2P51608 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MECP2P51608 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MECP2P51608 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.46■□□□□ 0.55
MECP2P51608 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MECP2P51608 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
MECP2P51608 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
MECP2P51608 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MECP2P51608 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.46■□□□□ 0.54
MECP2P51608 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
MECP2P51608 AC138932.1-201ENST00000534164 6830 ntBASIC18.45■□□□□ 0.54
MECP2P51608 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.45■□□□□ 0.54
MECP2P51608 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MECP2P51608 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MECP2P51608 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.45■□□□□ 0.54
MECP2P51608 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MECP2P51608 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MECP2P51608 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MECP2P51608 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.45■□□□□ 0.54
MECP2P51608 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MECP2P51608 AC012354.3-201ENST00000623734 483 ntBASIC18.45■□□□□ 0.54
MECP2P51608 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MECP2P51608 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MECP2P51608 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MECP2P51608 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MECP2P51608 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.45■□□□□ 0.54
MECP2P51608 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
MECP2P51608 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MECP2P51608 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.44■□□□□ 0.54
MECP2P51608 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.44■□□□□ 0.54
MECP2P51608 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MECP2P51608 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MECP2P51608 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MECP2P51608 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
MECP2P51608 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MECP2P51608 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
MECP2P51608 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MECP2P51608 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.44■□□□□ 0.54
MECP2P51608 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
MECP2P51608 MIR6765-201ENST00000614092 87 ntBASIC18.44■□□□□ 0.54
MECP2P51608 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MECP2P51608 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.44■□□□□ 0.54
MECP2P51608 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.44■□□□□ 0.54
MECP2P51608 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MECP2P51608 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MECP2P51608 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
MECP2P51608 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MECP2P51608 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MECP2P51608 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.43■□□□□ 0.54
MECP2P51608 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MECP2P51608 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms