Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB5CP51148 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB5CP51148 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB5CP51148 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB5CP51148 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB5CP51148 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RAB5CP51148 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB5CP51148 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB5CP51148 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB5CP51148 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB5CP51148 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB5CP51148 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB5CP51148 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB5CP51148 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB5CP51148 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB5CP51148 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB5CP51148 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB5CP51148 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB5CP51148 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB5CP51148 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RAB5CP51148 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RAB5CP51148 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RAB5CP51148 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5CP51148 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB5CP51148 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5CP51148 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5CP51148 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5CP51148 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
RAB5CP51148 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAB5CP51148 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.45■□□□□ 0.38
RAB5CP51148 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5CP51148 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB5CP51148 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB5CP51148 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB5CP51148 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RAB5CP51148 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5CP51148 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB5CP51148 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB5CP51148 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5CP51148 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5CP51148 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5CP51148 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5CP51148 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5CP51148 Z98882.1-201ENST00000622160 2253 ntBASIC17.44■□□□□ 0.38
RAB5CP51148 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5CP51148 RP9P-202ENST00000450133 1212 ntBASIC17.44■□□□□ 0.38
RAB5CP51148 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB5CP51148 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5CP51148 DUX4L11-201ENST00000611504 1267 ntBASIC17.44■□□□□ 0.38
RAB5CP51148 DUX4L12-201ENST00000614593 1267 ntBASIC17.44■□□□□ 0.38
RAB5CP51148 DUX4L14-201ENST00000621227 1267 ntBASIC17.44■□□□□ 0.38
RAB5CP51148 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5CP51148 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5CP51148 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB5CP51148 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5CP51148 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5CP51148 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB5CP51148 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5CP51148 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB5CP51148 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB5CP51148 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5CP51148 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5CP51148 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5CP51148 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB5CP51148 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB5CP51148 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5CP51148 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RAB5CP51148 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RAB5CP51148 FEM1AP4-201ENST00000443167 1987 ntBASIC17.43■□□□□ 0.38
RAB5CP51148 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5CP51148 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5CP51148 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB5CP51148 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.43■□□□□ 0.38
RAB5CP51148 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB5CP51148 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5CP51148 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB5CP51148 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB5CP51148 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB5CP51148 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5CP51148 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB5CP51148 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB5CP51148 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB5CP51148 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.42■□□□□ 0.38
RAB5CP51148 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.42■□□□□ 0.38
RAB5CP51148 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB5CP51148 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB5CP51148 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB5CP51148 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
RAB5CP51148 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB5CP51148 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB5CP51148 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RAB5CP51148 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB5CP51148 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RAB5CP51148 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB5CP51148 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RAB5CP51148 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5CP51148 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RAB5CP51148 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RAB5CP51148 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5CP51148 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms