Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF144AP50876 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF144AP50876 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RNF144AP50876 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF144AP50876 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF144AP50876 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF144AP50876 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF144AP50876 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF144AP50876 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF144AP50876 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF144AP50876 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF144AP50876 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF144AP50876 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF144AP50876 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF144AP50876 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF144AP50876 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
RNF144AP50876 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF144AP50876 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF144AP50876 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF144AP50876 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
RNF144AP50876 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF144AP50876 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF144AP50876 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF144AP50876 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RNF144AP50876 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF144AP50876 ESRRAP2-201ENST00000418437 1549 ntBASIC20.16■□□□□ 0.82
RNF144AP50876 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF144AP50876 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF144AP50876 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RNF144AP50876 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF144AP50876 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RNF144AP50876 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF144AP50876 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RNF144AP50876 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF144AP50876 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF144AP50876 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF144AP50876 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF144AP50876 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RNF144AP50876 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RNF144AP50876 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF144AP50876 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF144AP50876 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF144AP50876 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
RNF144AP50876 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF144AP50876 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
RNF144AP50876 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF144AP50876 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF144AP50876 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF144AP50876 AC139530.1-201ENST00000575312 1977 ntBASIC20.15■□□□□ 0.82
RNF144AP50876 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF144AP50876 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF144AP50876 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF144AP50876 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF144AP50876 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF144AP50876 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RNF144AP50876 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF144AP50876 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF144AP50876 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF144AP50876 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF144AP50876 UNC93B3-201ENST00000308076 687 ntBASIC20.14■□□□□ 0.81
RNF144AP50876 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF144AP50876 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
RNF144AP50876 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF144AP50876 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF144AP50876 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF144AP50876 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF144AP50876 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RNF144AP50876 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF144AP50876 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF144AP50876 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF144AP50876 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF144AP50876 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF144AP50876 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
RNF144AP50876 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
RNF144AP50876 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF144AP50876 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF144AP50876 AC242852.2-201ENST00000615738 1807 ntBASIC20.13■□□□□ 0.81
RNF144AP50876 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RNF144AP50876 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF144AP50876 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF144AP50876 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF144AP50876 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RNF144AP50876 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF144AP50876 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF144AP50876 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF144AP50876 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF144AP50876 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF144AP50876 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF144AP50876 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF144AP50876 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF144AP50876 AC096631.2-201ENST00000436136 790 ntBASIC20.12■□□□□ 0.81
RNF144AP50876 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF144AP50876 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF144AP50876 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF144AP50876 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
RNF144AP50876 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF144AP50876 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RNF144AP50876 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF144AP50876 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF144AP50876 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms